RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 RTL3Q8N8U3 475 aaKnown RBP12.85□□□□□ -0.35
TMEM53-206ENST00000420706 DDI1Q8WTU0 396 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 NXPE3Q969Y0 559 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 CAPZA3Q96KX2 299 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 TUBB2BQ9BVA1 445 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 KLC2Q9H0B6 622 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 EBF3Q9H4W6 596 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 KCNK12Q9HB15 430 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 HPS4Q9NQG7 708 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 NDFIP2Q9NV92 336 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 SMARCAL1Q9NZC9 954 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 MARK1Q9P0L2 795 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 IGSF9Q9P2J2 1179 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 THEGQ9P2T0 379 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 MYOFQ9NZM1 2061 aa12.85□□□□□ -0.35
TMEM53-206ENST00000420706 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.84□□□□□ -0.35
TMEM53-206ENST00000420706 A0A1B0GVM2 712 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 TYW5A2RUC4 315 aaKnown RBP12.84□□□□□ -0.35
TMEM53-206ENST00000420706 TCAF2A6NFQ2 919 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 LOC730098B7Z3J9 87 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 PDE2AO00408 941 aaPredicted RBP12.84□□□□□ -0.35
TMEM53-206ENST00000420706 NFATC1O95644 943 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 PENKP01210 267 aaPredicted RBP12.84□□□□□ -0.35
TMEM53-206ENST00000420706 CYP17A1P05093 508 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 ARSAP15289 507 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 TGM2P21980 687 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 HOXD9P28356 352 aaPredicted RBP12.84□□□□□ -0.35
TMEM53-206ENST00000420706 PAFAH1B1P43034 410 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 DYNLT1P63172 113 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 GAD2Q05329 585 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 SLC10A2Q12908 348 aaPredicted RBP12.84□□□□□ -0.35
TMEM53-206ENST00000420706 ZNF177Q13360 481 aaPredicted RBP12.84□□□□□ -0.35
TMEM53-206ENST00000420706 RUNX3Q13761 415 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 SIX1Q15475 284 aaPredicted RBP12.84□□□□□ -0.35
TMEM53-206ENST00000420706 AAK1Q2M2I8 961 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 ANO4Q32M45 955 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 TMCO3Q6UWJ1 677 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 NPNTQ6UXI9 565 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 SLC44A3Q8N4M1 653 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 LZTR1Q8N653 840 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 MAIP1Q8WWC4 291 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 ATP2A3Q93084 1043 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 ECT2Q9H8V3 914 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 DONSONQ9NYP3 566 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 PLK2Q9NYY3 685 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 CLEC4EQ9ULY5 219 aa12.84□□□□□ -0.35
TMEM53-206ENST00000420706 OTOL1A6NHN0 477 aaPredicted RBP12.83□□□□□ -0.36
TMEM53-206ENST00000420706 PGRMC1O00264 195 aaKnown RBP12.83□□□□□ -0.36
TMEM53-206ENST00000420706 LUC7L3O95232 432 aaKnown RBP12.83□□□□□ -0.36
TMEM53-206ENST00000420706 TYRP14679 529 aa12.83□□□□□ -0.36
TMEM53-206ENST00000420706 OR1E1P30953 314 aa12.83□□□□□ -0.36
TMEM53-206ENST00000420706 MAPKAPK2P49137 400 aa12.83□□□□□ -0.36
TMEM53-206ENST00000420706 TNK2Q07912 1038 aa12.83□□□□□ -0.36
TMEM53-206ENST00000420706 CCDC181Q5TID7 509 aa12.83□□□□□ -0.36
TMEM53-206ENST00000420706 C1orf228Q6PIY5 440 aa12.83□□□□□ -0.36
TMEM53-206ENST00000420706 TFAP2DQ7Z6R9 452 aa12.83□□□□□ -0.36
TMEM53-206ENST00000420706 ADAT2Q7Z6V5 191 aaKnown RBP12.83□□□□□ -0.36
TMEM53-206ENST00000420706 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.83□□□□□ -0.36
TMEM53-206ENST00000420706 TP53INP2Q8IXH6 220 aa12.83□□□□□ -0.36
TMEM53-206ENST00000420706 UMODL1-AS1Q8N2C9 162 aa12.83□□□□□ -0.36
TMEM53-206ENST00000420706 CARNMT1Q8N4J0 409 aa12.83□□□□□ -0.36
TMEM53-206ENST00000420706 NETO2Q8NC67 525 aa12.83□□□□□ -0.36
TMEM53-206ENST00000420706 BHMTQ93088 406 aa12.83□□□□□ -0.36
TMEM53-206ENST00000420706 NAP1L3Q99457 506 aaPredicted RBP12.83□□□□□ -0.36
TMEM53-206ENST00000420706 BBS2Q9BXC9 721 aa12.83□□□□□ -0.36
TMEM53-206ENST00000420706 SLC39A8Q9C0K1 460 aa12.83□□□□□ -0.36
TMEM53-206ENST00000420706 NOL6Q9H6R4 1146 aaKnown RBP12.83□□□□□ -0.36
TMEM53-206ENST00000420706 SAE1Q9UBE0 346 aaPredicted RBP12.83□□□□□ -0.36
TMEM53-206ENST00000420706 PRKAG3Q9UGI9 489 aa12.83□□□□□ -0.36
TMEM53-206ENST00000420706 FBXO10Q9UK96 956 aa12.83□□□□□ -0.36
TMEM53-206ENST00000420706 TBC1D30Q9Y2I9 924 aa12.83□□□□□ -0.36
TMEM53-206ENST00000420706 MRFAP1Q9Y605 127 aa12.83□□□□□ -0.36
TMEM53-206ENST00000420706 NEDD8-MDP1E9PL57 170 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 H0Y626 953 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 APOC4-APOC2K7ER74 178 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 ARNTLO00327 626 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 HOXC11O43248 304 aaPredicted RBP12.82□□□□□ -0.36
TMEM53-206ENST00000420706 MFSD11O43934 449 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 ADH1CP00326 375 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 APOC2P02655 101 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 ASGR2P07307 311 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 ADH5P11766 374 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 PECAM1P16284 738 aaPredicted RBP12.82□□□□□ -0.36
TMEM53-206ENST00000420706 SERPINB6P35237 376 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 NR2C2P49116 596 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 NDST2P52849 883 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 OTUD4Q01804 1114 aaKnown RBP12.82□□□□□ -0.36
TMEM53-206ENST00000420706 GBE1Q04446 702 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 NR1H3Q13133 447 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 WHAMMP3Q1A5X7 153 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 GAB4Q2WGN9 574 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 FSCBQ5H9T9 825 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 C6orf118Q5T5N4 469 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 AFMIDQ63HM1 303 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 SETD3Q86TU7 594 aaPredicted RBP12.82□□□□□ -0.36
TMEM53-206ENST00000420706 MFN1Q8IWA4 741 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 ARHGAP12Q8IWW6 846 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 ADHFE1Q8IWW8 467 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 NPWQ8N729 165 aa12.82□□□□□ -0.36
TMEM53-206ENST00000420706 TTC13Q8NBP0 860 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms