RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 TUBB4AP04350 444 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 APODP05090 189 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 BMP1P13497 986 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 ERCC2P18074 760 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 ETFBP38117 255 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 SGSHP51688 502 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 ZNF211Q13398 564 aaPredicted RBP8.71□□□□□ -1.02
TRIM48-201ENST00000417545 ANKRD20A8PQ5CZ79 823 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 MPP7Q5T2T1 576 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 FAM72AQ5TYM5 149 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 RNF219Q5W0B1 726 aaPredicted RBP8.71□□□□□ -1.02
TRIM48-201ENST00000417545 IL31Q6EBC2 164 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 FAM72DQ6L9T8 149 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 C1orf228Q6PIY5 440 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 RHBDF2Q6PJF5 856 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 SYT10Q6XYQ8 523 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 BZW1Q7L1Q6 419 aaKnown RBP8.71□□□□□ -1.02
TRIM48-201ENST00000417545 FAM72BQ86X60 149 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 UBALD2Q8IYN6 164 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 UCMAQ8WVF2 138 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 MAIP1Q8WWC4 291 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 RAPGEF5Q92565 580 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 CD101Q93033 1021 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 IGSF8Q969P0 613 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 MSANTD3Q96H12 275 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 HES6Q96HZ4 224 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 CSPG4P5Q96PW8 444 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 UHRF1Q96T88 793 aaPredicted RBP8.71□□□□□ -1.02
TRIM48-201ENST00000417545 FERMT1Q9BQL6 677 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 FAM83CQ9BQN1 747 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 SLC2A11Q9BYW1 496 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 RETREG1Q9H6L5 497 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 HPS4Q9NQG7 708 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 HEBP1Q9NRV9 189 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 CWC15Q9P013 229 aaKnown RBP8.71□□□□□ -1.02
TRIM48-201ENST00000417545 MARK1Q9P0L2 795 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 KIAA1522Q9P206 1035 aaPredicted RBP8.71□□□□□ -1.02
TRIM48-201ENST00000417545 CA14Q9ULX7 337 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 HPCAL4Q9UM19 191 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 DOCK4Q8N1I0 1966 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 MYOFQ9NZM1 2061 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 ARHGAP42A6NI28 874 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 SPECC1L-ADORA2AF8WAN1 911 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 DFFAO00273 331 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 DDX3YO15523 660 aaKnown RBP8.7□□□□□ -1.02
TRIM48-201ENST00000417545 CACNG3O60359 315 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 CNTN5O94779 1100 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 TJP3O95049 919 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 ATP1A1P05023 1023 aaKnown RBP8.7□□□□□ -1.02
TRIM48-201ENST00000417545 CD48P09326 243 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 TCP1P17987 556 aaKnown RBP8.7□□□□□ -1.02
TRIM48-201ENST00000417545 AMPD1P23109 780 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 HOXD9P28356 352 aaPredicted RBP8.7□□□□□ -1.02
TRIM48-201ENST00000417545 GJA4P35212 333 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 HCAR3P49019 387 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 ETF1P62495 437 aaKnown RBP8.7□□□□□ -1.02
TRIM48-201ENST00000417545 POLD3Q15054 466 aaPredicted RBP8.7□□□□□ -1.02
TRIM48-201ENST00000417545 E2F5Q15329 346 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 LLGL1Q15334 1064 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 PPP2R5EQ16537 467 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 ALFQ53S48 1182 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 FYB2Q5VWT5 728 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 MFSD7Q6UXD7 560 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 TPRG1Q6ZUI0 275 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 CYP4V2Q6ZWL3 525 aaPredicted RBP8.7□□□□□ -1.02
TRIM48-201ENST00000417545 ANKS1BQ7Z6G8 1248 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 SETD3Q86TU7 594 aaPredicted RBP8.7□□□□□ -1.02
TRIM48-201ENST00000417545 RALGPS2Q86X27 583 aaPredicted RBP8.7□□□□□ -1.02
TRIM48-201ENST00000417545 VSIG1Q86XK7 387 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 LZTR1Q8N653 840 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 RTL3Q8N8U3 475 aaKnown RBP8.7□□□□□ -1.02
TRIM48-201ENST00000417545 WFIKKN2Q8TEU8 576 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 NSMCE1Q8WV22 266 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 SHDQ96IW2 340 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 PBKQ96KB5 322 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 RNF157Q96PX1 679 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 PNKPQ96T60 521 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 NAP1L3Q99457 506 aaPredicted RBP8.7□□□□□ -1.02
TRIM48-201ENST00000417545 P2RY13Q9BPV8 354 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 SPON2Q9BUD6 331 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 HEMGNQ9BXL5 484 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 MAGEB5Q9BZ81 275 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 OSBPL8Q9BZF1 889 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 CIPCQ9C0C6 399 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 CARD9Q9H257 536 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 MFSD1Q9H3U5 465 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 PRDM16Q9HAZ2 1276 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 ATP13A1Q9HD20 1204 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 ARHGEF4Q9NR80 690 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 SLC2A4RGQ9NR83 387 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 ABCB8Q9NUT2 735 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 TMEM248Q9NWD8 314 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 SLC25A13Q9UJS0 675 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 VPS28Q9UK41 221 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 MRPS17Q9Y2R5 130 aaKnown RBP8.7□□□□□ -1.02
TRIM48-201ENST00000417545 HEY1Q9Y5J3 304 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 KIAA1549LQ6ZVL6 1849 aa8.7□□□□□ -1.02
TRIM48-201ENST00000417545 IGLV3-10A0A075B6K4 115 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 hCG_1818297A0A087WSY0 165 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 GOLGA6L10A0A0M3HER8 536 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms