RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 CCDC177Q9NQR7 707 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 AVENQ9NQS1 362 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 PI4KBQ9UBF8 816 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 KLQ9UEF7 1012 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 PCDHA12Q9UN75 941 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 PCDHGA8Q9Y5G5 932 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 LRP5O75197 1615 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 TNS3Q68CZ2 1445 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 MYH11P35749 1972 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 TRIM64A6NGJ6 449 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 HTRA2O43464 458 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 SLC26A4O43511 780 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 PSTPIP1O43586 416 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 ENTPD3O75355 529 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 DDHD2O94830 711 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 BPGMP07738 259 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 BMP3P12645 472 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 TSHRP16473 764 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 M6PRP20645 277 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 S100A5P33763 92 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 OPRL1P41146 370 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 GRIA3P42263 894 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 IDH3AP50213 366 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 NUDT2P50583 147 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 TMBIM6P55061 237 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 MLLT10P55197 1068 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 SEC13P55735 322 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 CABP4P57796 275 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 PRAMEP78395 509 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 FMO1Q01740 532 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 GAD2Q05329 585 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 KCNA1Q09470 495 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 GRSF1Q12849 480 aaKnown RBP eCLIP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 MAPRE1Q15691 268 aaKnown RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 GPR162Q16538 588 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 PIGGQ5H8A4 983 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 NHSL2Q5HYW2 709 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 TTC39BQ5VTQ0 682 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 FAM117BQ6P1L5 589 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 SLC30A10Q6XR72 485 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 BNC2Q6ZN30 1099 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 AGMOQ6ZNB7 445 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 PLEKHG7Q6ZR37 379 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 ZCCHC23Q6ZST2 131 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 SLC51BQ86UW2 128 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 OSTM1Q86WC4 334 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 RALGPS2Q86X27 583 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 ARHGEF19Q8IW93 802 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 UBR7Q8N806 425 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 ACMSDQ8TDX5 336 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 GIPC2Q8TF65 315 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 TP53INP1Q96A56 240 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 TXNDC15Q96J42 360 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 CDRT15Q96T59 188 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 RMDN3Q96TC7 470 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 C2orf49Q9BVC5 232 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 SEMA6AQ9H2E6 1030 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 CPVLQ9H3G5 476 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 POLR1BQ9H9Y6 1135 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 C12orf10Q9HB07 376 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 SLC38A10Q9HBR0 1119 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 NEK6Q9HC98 313 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 DNAJC28Q9NX36 388 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 NXF1Q9UBU9 619 aaKnown RBP6.54□□□□□ -1.36
CCNT1-202ENST00000417344 VPS28Q9UK41 221 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 A0A1B0GUL6 1792 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 ANKRD36CQ5JPF3 1778 aa6.54□□□□□ -1.36
CCNT1-202ENST00000417344 GLI3P10071 1580 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 ALS2Q96Q42 1657 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 SPATA31A5Q5VU36 1347 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 SPATA31A6Q5VVP1 1343 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 SPATA31A7Q8IWB4 1347 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 RGPD8O14715 1765 aaPredicted RBP6.53□□□□□ -1.36
CCNT1-202ENST00000417344 ARHGEF35A5YM69 484 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 TRIM49D1C9J1S8 452 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 E7ESA3 106 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 AP3B1O00203 1094 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 TAF4O00268 1085 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 TNPO2O14787 897 aaKnown RBP6.53□□□□□ -1.36
CCNT1-202ENST00000417344 AIM2O14862 343 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 AREL1O15033 823 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 ACOX3O15254 700 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 DCXO43602 365 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 ASNA1O43681 348 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 BCAS2O75934 225 aaPredicted RBP6.53□□□□□ -1.36
CCNT1-202ENST00000417344 FAM155BO75949 473 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 SLITRK3O94933 977 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 FKBP9O95302 570 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 CYP2D6P10635 497 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 KRT3P12035 628 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 SERPINB1P30740 379 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 MSX2P35548 267 aaPredicted RBP6.53□□□□□ -1.36
CCNT1-202ENST00000417344 ARL1P40616 181 aaPredicted RBP6.53□□□□□ -1.36
CCNT1-202ENST00000417344 ATXN3P54252 364 aaPredicted RBP6.53□□□□□ -1.36
CCNT1-202ENST00000417344 STX1BP61266 288 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 COPZ1P61923 177 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 PPP2R2BQ00005 443 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 MS4A2Q01362 244 aa6.53□□□□□ -1.36
CCNT1-202ENST00000417344 OCA2Q04671 838 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms