RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 TMEM121Q9BTD3 319 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 TKTL2Q9H0I9 626 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 TASP1Q9H6P5 420 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 DMAC2Q9NW81 257 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 RNASEH1O60930 286 aaKnown RBP13.09□□□□□ -0.31
SCAF8-203ENST00000417268 F2P00734 622 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 ZNF143P52747 638 aaPredicted RBP13.09□□□□□ -0.31
SCAF8-203ENST00000417268 MAMLD1Q13495 774 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 SPDYCQ5MJ68 293 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 FAM35AQ86V20 835 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 RAB42Q8N4Z0 105 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 GDPD5Q8WTR4 605 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 IGFLR1Q9H665 355 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 CNGB3Q9NQW8 809 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 ASAH2Q9NR71 780 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 RBM22Q9NW64 420 aaKnown RBP eCLIP13.09□□□□□ -0.314e-7■■■■■ 38
SCAF8-203ENST00000417268 SRP72O76094 671 aaKnown RBP13.09□□□□□ -0.31
SCAF8-203ENST00000417268 ATP6V1C1P21283 382 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 KCTD21Q4G0X4 260 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 WLSQ5T9L3 541 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 LPCAT2Q7L5N7 544 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 CTU1Q7Z7A3 348 aaKnown RBP13.09□□□□□ -0.31
SCAF8-203ENST00000417268 SAR1AQ9NR31 198 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 STK39Q9UEW8 545 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 HIST1H2AGP0C0S8 130 aaPredicted RBP13.09□□□□□ -0.31
SCAF8-203ENST00000417268 HIST1H2ADP20671 130 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 SERPINB5P36952 375 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 GLUD2P49448 558 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 TLE2Q04725 743 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 TRADDQ15628 312 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 MFSD7Q6UXD7 560 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 IRF2BP2Q7Z5L9 587 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 NPAS4Q8IUM7 802 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 ZNF555Q8NEP9 628 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 SH3KBP1Q96B97 665 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 HIST1H2AHQ96KK5 128 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 HIST1H2AJQ99878 128 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 H2AFJQ9BTM1 129 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 DUSP16Q9BY84 665 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 TAS2R14Q9NYV8 317 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 CTNNAL1Q9UBT7 734 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 SNX13Q9Y5W8 968 aa13.09□□□□□ -0.31
SCAF8-203ENST00000417268 BAZ2AQ9UIF9 1905 aaKnown RBP13.09□□□□□ -0.31
SCAF8-203ENST00000417268 RNF225M0QZC1 329 aaPredicted RBP13.08□□□□□ -0.31
SCAF8-203ENST00000417268 TM9SF1O15321 606 aa13.08□□□□□ -0.31
SCAF8-203ENST00000417268 CYP1A2P05177 515 aa13.08□□□□□ -0.31
SCAF8-203ENST00000417268 HSPA1AP0DMV8 641 aaKnown RBP13.08□□□□□ -0.31
SCAF8-203ENST00000417268 HSPA1BP0DMV9 641 aaKnown RBP13.08□□□□□ -0.31
SCAF8-203ENST00000417268 OR1D2P34982 312 aa13.08□□□□□ -0.31
SCAF8-203ENST00000417268 LRRC38Q5VT99 294 aa13.08□□□□□ -0.31
SCAF8-203ENST00000417268 PLEKHA7Q6IQ23 1121 aa13.08□□□□□ -0.31
SCAF8-203ENST00000417268 OTOP2Q7RTS6 562 aa13.08□□□□□ -0.31
SCAF8-203ENST00000417268 TFAP2DQ7Z6R9 452 aa13.08□□□□□ -0.31
SCAF8-203ENST00000417268 TMCO5AQ8N6Q1 288 aa13.08□□□□□ -0.31
SCAF8-203ENST00000417268 PCYOX1LQ8NBM8 494 aa13.08□□□□□ -0.31
SCAF8-203ENST00000417268 LNX1Q8TBB1 728 aaPredicted RBP13.08□□□□□ -0.31
SCAF8-203ENST00000417268 FAM84AQ96KN4 292 aa13.08□□□□□ -0.31
SCAF8-203ENST00000417268 FOPNLQ96NB1 174 aa13.08□□□□□ -0.31
SCAF8-203ENST00000417268 MRPL45Q9BRJ2 306 aaKnown RBP13.08□□□□□ -0.31
SCAF8-203ENST00000417268 EML4Q9HC35 981 aaKnown RBP13.08□□□□□ -0.31
SCAF8-203ENST00000417268 NINJ2Q9NZG7 142 aa13.08□□□□□ -0.31
SCAF8-203ENST00000417268 KIF17Q9P2E2 1029 aa13.08□□□□□ -0.31
SCAF8-203ENST00000417268 AFF4Q9UHB7 1163 aaKnown RBP13.08□□□□□ -0.31
SCAF8-203ENST00000417268 C4AP0C0L4 1744 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 ZNF197O14709 1029 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 GJB6O95452 261 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 CXCL14O95715 111 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 FAM58BPP0C7Q3 252 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 AUHQ13825 339 aaKnown RBP13.08□□□□□ -0.32
SCAF8-203ENST00000417268 PTRHD1Q6GMV3 140 aaKnown RBP13.08□□□□□ -0.32
SCAF8-203ENST00000417268 ZNF662Q6ZS27 426 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 FAM183BPQ6ZVS7 135 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 DEFB107AQ8IZN7 70 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 LGI2Q8N0V4 545 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 C12orf29Q8N999 325 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 FAM81AQ8TBF8 368 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 BLOC1S5Q8TDH9 187 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 TCP10LQ8TDR4 215 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 SNX27Q96L92 541 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 TSEN34Q9BSV6 310 aaKnown RBP13.08□□□□□ -0.32
SCAF8-203ENST00000417268 ATP13A1Q9HD20 1204 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.08□□□□□ -0.32
SCAF8-203ENST00000417268 DNAJC16Q9Y2G8 782 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 SDR42E2A6NKP2 422 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 SLC9A3R1O14745 358 aaPredicted RBP13.08□□□□□ -0.32
SCAF8-203ENST00000417268 CST3P01034 146 aaPredicted RBP13.08□□□□□ -0.32
SCAF8-203ENST00000417268 CALCAP01258 141 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 PYGMP11217 842 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 IGFBP4P22692 258 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 SYTL3Q4VX76 610 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 KATNAL2Q8IYT4 538 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 CCDC33Q8N5R6 958 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 ZNF75CPQ92670 426 aaPredicted RBP13.08□□□□□ -0.32
SCAF8-203ENST00000417268 KREMEN1Q96MU8 473 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 FAM210AQ96ND0 272 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 OXCT2Q9BYC2 517 aaPredicted RBP13.08□□□□□ -0.32
SCAF8-203ENST00000417268 PCDH9Q9HC56 1237 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 SCUBE2Q9NQ36 999 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 RNF186Q9NXI6 227 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 DNMT3LQ9UJW3 386 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms