RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 PFKFB3Q16875 520 aaPredicted RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 ERCC6LQ2NKX8 1250 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 HFEQ30201 348 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 TRIM60Q495X7 471 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 CFAP157Q5JU67 520 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 RNFT1Q5M7Z0 435 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 SPDYAQ5MJ70 313 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 RBM20Q5T481 1227 aaKnown RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 TMTC4Q5T4D3 741 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 EMC10Q5UCC4 262 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 SFMBT2Q5VUG0 894 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 CPZQ66K79 652 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 PDPK2PQ6A1A2 396 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 RCSD1Q6JBY9 416 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 KIAA1841Q6NSI8 718 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 RINT1Q6NUQ1 792 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 DPY19L2P1Q6NXN4 242 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 NEK5Q6P3R8 708 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 CRELD2Q6UXH1 353 aaPredicted RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 KIF6Q6ZMV9 814 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 DBX2Q6ZNG2 339 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 KIAA0408Q6ZU52 694 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 ILDR2Q71H61 639 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 TUBA1AQ71U36 451 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 LYSMD3Q7Z3D4 306 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 PRICKLE2Q7Z3G6 844 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 DSG4Q86SJ6 1040 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 TRIM74Q86UV6 250 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 TRIM73Q86UV7 250 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 PSTKQ8IV42 348 aaKnown RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 LINC00346Q8IVM7 164 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 RHOT2Q8IXI1 618 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 PHC2Q8IXK0 858 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 PALM2Q8IXS6 379 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 DDIASQ8IXT1 998 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 FAM185AQ8N0U4 392 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 CLYBLQ8N0X4 340 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 ZCCHC7Q8N3Z6 543 aaKnown RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 RASGEF1CQ8N431 466 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 FSTL5Q8N475 847 aaPredicted RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 ZNF366Q8N895 744 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 GLB1L3Q8NCI6 653 aaPredicted RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 RNF214Q8ND24 703 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 MCUQ8NE86 351 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 OR8K5Q8NH50 307 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 GANCQ8TET4 914 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 RNF141Q8WVD5 230 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 METTL21AQ8WXB1 218 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 CFHR4Q92496 578 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 CORO2AQ92828 525 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 FAM149B1Q96BN6 582 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 HDAC11Q96DB2 347 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 VWCEQ96DN2 955 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 PHF21BQ96EK2 531 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 C14orf79Q96F83 325 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 EDC3Q96F86 508 aaKnown RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 TSPAN17Q96FV3 270 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 MSANTD3Q96H12 275 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 C7orf34Q96L11 122 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 DGAT2Q96PD7 388 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 CDK5RAP1Q96SZ6 601 aaKnown RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 INSM2Q96T92 566 aaPredicted RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 ZBTB18Q99592 522 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 EIF3CQ99613 913 aaKnown RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 HNRNPABQ99729 332 aaKnown RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 EGFL8Q99944 293 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 PKP2Q99959 881 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 VRK1Q99986 396 aaPredicted RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 PIMREGQ9BSJ6 248 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 MTG1Q9BT17 334 aaPredicted RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 MYL10Q9BUA6 226 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 HTATIP2Q9BUP3 242 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 B3GNT4Q9C0J1 378 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 POLR1EQ9GZS1 481 aaKnown RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 LACRTQ9GZZ8 138 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 GLT8D2Q9H1C3 349 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 ADAM7Q9H2U9 754 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 OSGEPL1Q9H4B0 414 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 COQ10BQ9H8M1 238 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 GORASP2Q9H8Y8 452 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 SYTL2Q9HCH5 934 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 ZBTB26Q9HCK0 441 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 MED4Q9NPJ6 270 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 HPS4Q9NQG7 708 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 CHST7Q9NS84 486 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 RAD18Q9NS91 495 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 AGPAT5Q9NUQ2 364 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 POLR3BQ9NW08 1133 aaPredicted RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 SOHLH2Q9NX45 425 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 HCN3Q9P1Z3 774 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 THEGQ9P2T0 379 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 LRIT1Q9P2V4 623 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 SLC25A10Q9UBX3 287 aaPredicted RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 TNFSF13BQ9Y275 285 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 MRPS7Q9Y2R9 242 aaKnown RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 RWDD3Q9Y3V2 267 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 PCDHGA5Q9Y5G8 931 aa3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 TIMM13Q9Y5L4 95 aaPredicted RBP3.24□□□□□ -1.89
CTDSPL-203ENST00000416688 AOX1Q06278 1338 aa3.23□□□□□ -1.89
CTDSPL-203ENST00000416688 NPHP3Q7Z494 1330 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms