RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 BTN2A3PQ96KV6 586 aa21.19■□□□□ 0.98
PTPRU-203ENST00000415600 EDEM3Q9BZQ6 932 aa21.19■□□□□ 0.98
PTPRU-203ENST00000415600 LHX5Q9H2C1 402 aa21.19■□□□□ 0.98
PTPRU-203ENST00000415600 TMEM245Q9H330 911 aa21.19■□□□□ 0.98
PTPRU-203ENST00000415600 PPP2R2CQ9Y2T4 447 aa21.19■□□□□ 0.98
PTPRU-203ENST00000415600 UPK3BL1B0FP48 263 aa21.18■□□□□ 0.98
PTPRU-203ENST00000415600 UPK3BL2E5RIL1 263 aa21.18■□□□□ 0.98
PTPRU-203ENST00000415600 KIF2AO00139 706 aaPredicted RBP21.18■□□□□ 0.98
PTPRU-203ENST00000415600 RNASEH1O60930 286 aaKnown RBP21.18■□□□□ 0.98
PTPRU-203ENST00000415600 MOCS2O96007 188 aaPredicted RBP21.18■□□□□ 0.98
PTPRU-203ENST00000415600 SLC9A1P19634 815 aa21.18■□□□□ 0.98
PTPRU-203ENST00000415600 RDXP35241 583 aaKnown RBP21.18■□□□□ 0.98
PTPRU-203ENST00000415600 CDK17Q00537 523 aa21.18■□□□□ 0.98
PTPRU-203ENST00000415600 ZNF252P-AS1Q0IIN9 211 aa21.18■□□□□ 0.98
PTPRU-203ENST00000415600 TSR1Q2NL82 804 aaKnown RBP21.18■□□□□ 0.98
PTPRU-203ENST00000415600 EFHC1Q5JVL4 640 aa21.18■□□□□ 0.98
PTPRU-203ENST00000415600 RAD9BQ6WBX8 426 aa21.18■□□□□ 0.98
PTPRU-203ENST00000415600 REXO1L1PQ8IX06 675 aa21.18■□□□□ 0.98
PTPRU-203ENST00000415600 ATP6V0D2Q8N8Y2 350 aa21.18■□□□□ 0.98
PTPRU-203ENST00000415600 ZNF397Q8NF99 534 aaPredicted RBP21.18■□□□□ 0.98
PTPRU-203ENST00000415600 SHC3Q92529 594 aa21.18■□□□□ 0.98
PTPRU-203ENST00000415600 SYNCQ9H7C4 482 aa21.18■□□□□ 0.98
PTPRU-203ENST00000415600 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.18■□□□□ 0.98
PTPRU-203ENST00000415600 TNRC6BQ9UPQ9 1833 aaKnown RBP21.17■□□□□ 0.98
PTPRU-203ENST00000415600 EPG5Q9HCE0 2579 aa21.17■□□□□ 0.98
PTPRU-203ENST00000415600 A0A1B0GTW7 788 aa21.17■□□□□ 0.98
PTPRU-203ENST00000415600 GOLGA6L7A0A1B0GV03 622 aa21.17■□□□□ 0.98
PTPRU-203ENST00000415600 PAPSS1O43252 624 aaPredicted RBP21.17■□□□□ 0.98
PTPRU-203ENST00000415600 DNTTP04053 509 aa21.17■□□□□ 0.98
PTPRU-203ENST00000415600 FYNP06241 537 aa21.17■□□□□ 0.98
PTPRU-203ENST00000415600 HLA-EP13747 358 aa21.17■□□□□ 0.98
PTPRU-203ENST00000415600 TNNT1P13805 278 aa21.17■□□□□ 0.98
PTPRU-203ENST00000415600 PON1P27169 355 aa21.17■□□□□ 0.98
PTPRU-203ENST00000415600 SLC6A4P31645 630 aa21.17■□□□□ 0.98
PTPRU-203ENST00000415600 COPAP53621 1224 aa21.17■□□□□ 0.98
PTPRU-203ENST00000415600 HNRNPDQ14103 355 aaKnown RBP21.17■□□□□ 0.98
PTPRU-203ENST00000415600 MS4A13Q5J8X5 152 aa21.17■□□□□ 0.98
PTPRU-203ENST00000415600 TAC4Q86UU9 113 aa21.17■□□□□ 0.98
PTPRU-203ENST00000415600 CARNMT1Q8N4J0 409 aa21.17■□□□□ 0.98
PTPRU-203ENST00000415600 SLC39A13Q96H72 371 aa21.17■□□□□ 0.98
PTPRU-203ENST00000415600 FAM204AQ9H8W3 233 aa21.17■□□□□ 0.98
PTPRU-203ENST00000415600 ASNSD1Q9NWL6 643 aa21.17■□□□□ 0.98
PTPRU-203ENST00000415600 PCDHGC3Q9UN70 934 aa21.17■□□□□ 0.98
PTPRU-203ENST00000415600 CEP192Q8TEP8 1941 aa21.16■□□□□ 0.98
PTPRU-203ENST00000415600 GOLGA6L9A6NEM1 432 aa21.16■□□□□ 0.98
PTPRU-203ENST00000415600 H0Y626 953 aa21.16■□□□□ 0.98
PTPRU-203ENST00000415600 HSF2BPO75031 334 aa21.16■□□□□ 0.98
PTPRU-203ENST00000415600 TRUB2O95900 331 aaKnown RBP21.16■□□□□ 0.98
PTPRU-203ENST00000415600 ABCB4P21439 1286 aa21.16■□□□□ 0.98
PTPRU-203ENST00000415600 OXCT1P55809 520 aa21.16■□□□□ 0.98
PTPRU-203ENST00000415600 SLC14A1Q13336 389 aa21.16■□□□□ 0.98
PTPRU-203ENST00000415600 DCAF6Q58WW2 860 aa21.16■□□□□ 0.98
PTPRU-203ENST00000415600 TTC39BQ5VTQ0 682 aaPredicted RBP21.16■□□□□ 0.98
PTPRU-203ENST00000415600 RNF219Q5W0B1 726 aaPredicted RBP21.16■□□□□ 0.98
PTPRU-203ENST00000415600 CHSY1Q86X52 802 aa21.16■□□□□ 0.98
PTPRU-203ENST00000415600 KDM1BQ8NB78 822 aa21.16■□□□□ 0.98
PTPRU-203ENST00000415600 NEK11Q8NG66 645 aa21.16■□□□□ 0.98
PTPRU-203ENST00000415600 ADAM32Q8TC27 787 aa21.16■□□□□ 0.98
PTPRU-203ENST00000415600 DNASE2BQ8WZ79 361 aa21.16■□□□□ 0.98
PTPRU-203ENST00000415600 RNF34Q969K3 372 aa21.16■□□□□ 0.98
PTPRU-203ENST00000415600 PDCL3Q9H2J4 239 aa21.16■□□□□ 0.98
PTPRU-203ENST00000415600 TMEM51Q9NW97 253 aa21.16■□□□□ 0.98
PTPRU-203ENST00000415600 KIAA1522Q9P206 1035 aaPredicted RBP21.16■□□□□ 0.98
PTPRU-203ENST00000415600 CHD8Q9HCK8 2581 aa21.16■□□□□ 0.98
PTPRU-203ENST00000415600 LAMA1P25391 3075 aa21.15■□□□□ 0.98
PTPRU-203ENST00000415600 F5H5T6 163 aa21.15■□□□□ 0.98
PTPRU-203ENST00000415600 TUBB4AP04350 444 aa21.15■□□□□ 0.98
PTPRU-203ENST00000415600 CD70P32970 193 aa21.15■□□□□ 0.98
PTPRU-203ENST00000415600 SGSHP51688 502 aa21.15■□□□□ 0.98
PTPRU-203ENST00000415600 SYPL2Q5VXT5 272 aa21.15■□□□□ 0.98
PTPRU-203ENST00000415600 NADSYN1Q6IA69 706 aa21.15■□□□□ 0.98
PTPRU-203ENST00000415600 GJB7Q6PEY0 223 aa21.15■□□□□ 0.98
PTPRU-203ENST00000415600 CACUL1Q86Y37 369 aa21.15■□□□□ 0.98
PTPRU-203ENST00000415600 MINDY1Q8N5J2 469 aa21.15■□□□□ 0.98
PTPRU-203ENST00000415600 NUCKS1Q9H1E3 243 aaKnown RBP21.15■□□□□ 0.98
PTPRU-203ENST00000415600 MIR1-1HGQ9H1L0 117 aa21.15■□□□□ 0.98
PTPRU-203ENST00000415600 CD93Q9NPY3 652 aa21.15■□□□□ 0.98
PTPRU-203ENST00000415600 FAM207AQ9NSI2 230 aaPredicted RBP21.15■□□□□ 0.98
PTPRU-203ENST00000415600 DNAJC12Q9UKB3 198 aa21.15■□□□□ 0.98
PTPRU-203ENST00000415600 SCML1Q9UN30 329 aa21.15■□□□□ 0.98
PTPRU-203ENST00000415600 NCKAP1Q9Y2A7 1128 aa21.15■□□□□ 0.98
PTPRU-203ENST00000415600 CKAP5Q14008 2032 aa21.15■□□□□ 0.98
PTPRU-203ENST00000415600 METTL12A8MUP2 240 aa21.14■□□□□ 0.98
PTPRU-203ENST00000415600 EPHB6O15197 1021 aa21.14■□□□□ 0.98
PTPRU-203ENST00000415600 CCDC175P0C221 793 aa21.14■□□□□ 0.98
PTPRU-203ENST00000415600 HNRNPH3P31942 346 aaKnown RBP21.14■□□□□ 0.98
PTPRU-203ENST00000415600 CCR1P32246 355 aa21.14■□□□□ 0.98
PTPRU-203ENST00000415600 RPS24P62847 133 aaKnown RBP21.14■□□□□ 0.98
PTPRU-203ENST00000415600 PTPRNQ16849 979 aa21.14■□□□□ 0.98
PTPRU-203ENST00000415600 ZC3H12AQ5D1E8 599 aaKnown RBP21.14■□□□□ 0.98
PTPRU-203ENST00000415600 RABGAP1LQ5R372 815 aa21.14■□□□□ 0.98
PTPRU-203ENST00000415600 DCAF12L1Q5VU92 463 aa21.14■□□□□ 0.98
PTPRU-203ENST00000415600 ZNF776Q68DI1 518 aaPredicted RBP21.14■□□□□ 0.98
PTPRU-203ENST00000415600 WDR59Q6PJI9 974 aa21.14■□□□□ 0.98
PTPRU-203ENST00000415600 IL27RAQ6UWB1 636 aa21.14■□□□□ 0.98
PTPRU-203ENST00000415600 LGI2Q8N0V4 545 aa21.14■□□□□ 0.98
PTPRU-203ENST00000415600 DEFB124Q8NES8 71 aa21.14■□□□□ 0.98
PTPRU-203ENST00000415600 TTC17Q96AE7 1141 aa21.14■□□□□ 0.98
PTPRU-203ENST00000415600 ZNHIT6Q9NWK9 470 aaKnown RBP21.14■□□□□ 0.98
PTPRU-203ENST00000415600 ADGRG1Q9Y653 693 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms