RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 HADHAP40939 763 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 BMXP51813 675 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 PHC1P78364 1004 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 TDRD12Q587J7 1177 aaKnown RBP20.88■□□□□ 0.93
AP1S3-205ENST00000415298 FAM102BQ5T8I3 360 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 HGSNATQ68CP4 663 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 KIAA1841Q6NSI8 718 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 CXCL17Q6UXB2 119 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 EPM2AIP1Q7L775 607 aaPredicted RBP20.88■□□□□ 0.93
AP1S3-205ENST00000415298 TICAM1Q8IUC6 712 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 MINDY2Q8NBR6 621 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 TMEM143Q96AN5 459 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 HES6Q96HZ4 224 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 C7orf26Q96N11 449 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 MTMR12Q9C0I1 747 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 HEY2Q9UBP5 337 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 DAPK2Q9UIK4 370 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 PCDHGB4Q9UN71 923 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 DTNAQ9Y4J8 743 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 PCDHGB5Q9Y5G0 923 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 ARID2Q68CP9 1835 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 FOXO6A8MYZ6 492 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 SPARCL1Q14515 664 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 SLX4IPQ5VYV7 408 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 LHX8Q68G74 356 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 KYAT3Q6YP21 454 aaKnown RBP20.88■□□□□ 0.93
AP1S3-205ENST00000415298 OTOAQ7RTW8 1153 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 POU5F2Q8N7G0 328 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 ANKRD53Q8N9V6 530 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 DCUN1D5Q9BTE7 237 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 UNC93B1Q9H1C4 597 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 HIPK3Q9H422 1215 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 TMEM206Q9H813 350 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 NPHS2Q9NP85 383 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 PCDHA2Q9Y5H9 948 aa20.88■□□□□ 0.93
AP1S3-205ENST00000415298 PSMD12O00232 456 aaPredicted RBP20.87■□□□□ 0.93
AP1S3-205ENST00000415298 EPHB6O15197 1021 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 CAPN1P07384 714 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 PURAQ00577 322 aaKnown RBP20.87■□□□□ 0.93
AP1S3-205ENST00000415298 GRAMD1BQ3KR37 738 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 MYCT1Q8N699 235 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 HERC2P3Q9BVR0 1158 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 LOXHD1Q8IVV2 1947 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 MYOCOSA0A1B0GUC4 107 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 B2RBV5 119 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 GPD2P43304 727 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 SLC26A2P50443 739 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 HIC1Q14526 733 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 PLEKHG4Q58EX7 1191 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 XKR5Q6UX68 686 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 LRRC71Q8N4P6 559 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.87■□□□□ 0.93
AP1S3-205ENST00000415298 TSPAN14Q8NG11 270 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 PYDC1Q8WXC3 89 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 ATP2A3Q93084 1043 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 DHX33Q9H6R0 707 aaKnown RBP20.87■□□□□ 0.93
AP1S3-205ENST00000415298 FARSBQ9NSD9 589 aaKnown RBP20.87■□□□□ 0.93
AP1S3-205ENST00000415298 FAM207AQ9NSI2 230 aaPredicted RBP20.87■□□□□ 0.93
AP1S3-205ENST00000415298 SIK3Q9Y2K2 1263 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 CPQQ9Y646 472 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 EVPLQ92817 2033 aa20.87■□□□□ 0.93
AP1S3-205ENST00000415298 J3QRK9 145 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 SNPHO15079 494 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 HBP1O60381 514 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 DGAT1O75907 488 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 FAM13AO94988 1023 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 F2P00734 622 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 SMARCB1Q12824 385 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 LAPTM5Q13571 262 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 JAMLQ86YT9 394 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 SRRM1Q8IYB3 904 aaKnown RBP20.86■□□□□ 0.93
AP1S3-205ENST00000415298 FBXL8Q96CD0 374 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 CNBD2Q96M20 576 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 INO80BQ9C086 356 aaPredicted RBP20.86■□□□□ 0.93
AP1S3-205ENST00000415298 SETD4Q9NVD3 440 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 KCND2Q9NZV8 630 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 PLA2G4CQ9UP65 541 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 CAPN8A6NHC0 703 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 TAF4O00268 1085 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 NMT1P30419 496 aaKnown RBP20.86■□□□□ 0.93
AP1S3-205ENST00000415298 PKLRP30613 574 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 EVI2BP34910 448 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 HAAOP46952 286 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 CETN1Q12798 172 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 EMC2Q15006 297 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 KCNA10Q16322 511 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 SCARA3Q6AZY7 606 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 ZNF600Q6ZNG1 722 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 ADAMTSL2Q86TH1 951 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 BSNDQ8WZ55 320 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 BAP1Q92560 729 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 ISOC1Q96CN7 298 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 FAM167AQ96KS9 214 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 CNOT6LQ96LI5 555 aaKnown RBP20.86■□□□□ 0.93
AP1S3-205ENST00000415298 UPF3AQ9H1J1 476 aaKnown RBP20.86■□□□□ 0.93
AP1S3-205ENST00000415298 WASH6PQ9NQA3 447 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 KANSL3Q9P2N6 904 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 UBA2Q9UBT2 640 aaPredicted RBP20.86■□□□□ 0.93
AP1S3-205ENST00000415298 POLHQ9Y253 713 aa20.86■□□□□ 0.93
AP1S3-205ENST00000415298 H0YC42 278 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms