RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 H0Y626 953 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 LETM1O95202 739 aaPredicted RBP12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 LUC7L3O95232 432 aaKnown RBP12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 TRIM16O95361 564 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 TRUB2O95900 331 aaKnown RBP12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 ATXN1LP0C7T5 689 aaKnown RBP12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 VAV1P15498 845 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 TACR2P21452 398 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 MZF1P28698 734 aaPredicted RBP12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 MATKP42679 507 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 CTSKP43235 329 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 GALCP54803 685 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 ZBTB16Q05516 673 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 HNRNPDQ14103 355 aaKnown RBP12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 MEA1Q16626 185 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 ZNF423Q2M1K9 1284 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 RAP1GAP2Q684P5 730 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 TRIM65Q6PJ69 517 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 CCNI2Q6ZMN8 369 aaPredicted RBP12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 DHX40Q8IX18 779 aaKnown RBP12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 CARNMT1Q8N4J0 409 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 AADATQ8N5Z0 425 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 KDM1BQ8NB78 822 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 HJURPQ8NCD3 748 aaPredicted RBP12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 IGSF8Q969P0 613 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 FAM131CQ96AQ9 280 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 SERPINB11Q96P15 392 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 SLC2A13Q96QE2 648 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 CPXM1Q96SM3 734 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 BTBD1Q9H0C5 482 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 NEUROG2Q9H2A3 272 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 PABPC3Q9H361 631 aaKnown RBP12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 ANO10Q9NW15 660 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 KIAA1522Q9P206 1035 aaPredicted RBP12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 ANKRD6Q9Y2G4 727 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 PCDHGB2Q9Y5G2 931 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 ANKRD11Q6UB99 2663 aaPredicted RBP12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 ADAMTS20P59510 1910 aa12.86□□□□□ -0.35
NCKIPSD-203ENST00000415281 SMG1Q96Q15 3661 aaKnown RBP12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 TMEM8BA6NDV4 472 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 H0Y8X5 98 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 RNF103O00237 685 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 MID1O15344 667 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 MOCS2O96007 188 aaPredicted RBP12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 ATP5BP06576 529 aaKnown RBP12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 CD27P26842 260 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 CLCN1P35523 988 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 STK19P49842 368 aaPredicted RBP12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 PLK1P53350 603 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 YWHAZP63104 245 aaKnown RBP12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 ARID5AQ03989 594 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 PDCLQ13371 301 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 E2F5Q15329 346 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 KLHL40Q2TBA0 621 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 PRAMEF14Q5SWL7 426 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 CXorf57Q6NSI4 855 aaKnown RBP12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 C11orf57Q6ZUT1 292 aaPredicted RBP12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 C14orf80Q86SX3 495 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 CIR1Q86X95 450 aaPredicted RBP12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 LGI2Q8N0V4 545 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 DEFB106AQ8N104 65 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 FRS2Q8WU20 508 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 ZCCHC14Q8WYQ9 949 aaKnown RBP12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 SHC3Q92529 594 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 RPL10LQ96L21 214 aaKnown RBP12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 THAP9Q9H5L6 903 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 ST7Q9NRC1 585 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 SAMSN1Q9NSI8 373 aaKnown RBP12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 ADAMTS1Q9UHI8 967 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 OR51B4Q9Y5P0 310 aa12.85□□□□□ -0.35
NCKIPSD-203ENST00000415281 A0A1W2PP55 124 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 A0A1W2PR77 199 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 THAP12O43422 761 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 FSBPO95073 299 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 DNTTP04053 509 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 SRPRAP08240 638 aaKnown RBP12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 PNMA6AP0CW24 399 aaPredicted RBP12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 KRT5P13647 590 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 TFE3P19532 575 aaPredicted RBP12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 PTMSP20962 102 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 PON1P27169 355 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 GNA15P30679 374 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 DRD3P35462 400 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 ACADSBP45954 432 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 MTIF2P46199 727 aaKnown RBP12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 GRIA4P48058 902 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 AFF3P51826 1226 aaKnown RBP12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 TYRO3Q06418 890 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 SCAPQ12770 1279 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 CAMK2BQ13554 666 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 CST6Q15828 149 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 STX1AQ16623 288 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 ARHGAP44Q17R89 818 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 CT47A1Q5JQC4 288 aaPredicted RBP12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 ZNF776Q68DI1 518 aaPredicted RBP12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 KIAA0895LQ68EN5 471 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 USP30Q70CQ3 517 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 MMAAQ8IVH4 418 aaKnown RBP12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 ZNF683Q8IZ20 524 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms