RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 ADIPOQQ15848 244 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 KYNUQ16719 465 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 C5orf22Q49AR2 442 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 DUSP28Q4G0W2 176 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.75□□□□□ -1.97
MCF2-204ENST00000414978 EMC10Q5UCC4 262 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 MANEALQ5VSG8 457 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 CATSPERGQ6ZRH7 1159 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 KDELC2Q7Z4H8 507 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 PROSER1Q86XN7 944 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 SCML4Q8N228 414 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.75□□□□□ -1.97
MCF2-204ENST00000414978 NETO2Q8NC67 525 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 PDZD8Q8NEN9 1154 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 TBC1D31Q96DN5 1066 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 MARS2Q96GW9 593 aaKnown RBP2.75□□□□□ -1.97
MCF2-204ENST00000414978 CLIC6Q96NY7 704 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 ABHD1Q96SE0 405 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 DPYSL5Q9BPU6 564 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 ADPGKQ9BRR6 497 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 CTDSP1Q9GZU7 261 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 WNT8AQ9H1J5 351 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 CCDC68Q9H2F9 335 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 L2HGDHQ9H9P8 463 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 CFAP97Q9P2B7 532 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 ZBTB1Q9Y2K1 713 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 PSAT1Q9Y617 370 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 COL4A4P53420 1690 aaPredicted RBP2.75□□□□□ -1.97
MCF2-204ENST00000414978 BTBD11A6QL63 1104 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 CBFA2T3O75081 653 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 PHF2O75151 1096 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 CSPG5O95196 566 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 CYP1A1P04798 512 aaPredicted RBP2.74□□□□□ -1.97
MCF2-204ENST00000414978 TXNP10599 105 aaKnown RBP2.74□□□□□ -1.97
MCF2-204ENST00000414978 XRCC6P12956 609 aaKnown RBP eCLIP2.74□□□□□ -1.97
MCF2-204ENST00000414978 RPL17P18621 184 aaKnown RBP2.74□□□□□ -1.97
MCF2-204ENST00000414978 THBS4P35443 961 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 KRT2P35908 639 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 MTHFSP49914 203 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 ACTR2P61160 394 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 CXCL9Q07325 125 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 NFATC3Q12968 1075 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 ARHGEF7Q14155 803 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 PSMD6Q15008 389 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 VMACQ2NL98 169 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 TMEM196Q5HYL7 178 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 NOMO2Q5JPE7 1267 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 GKAP1Q5VSY0 366 aaPredicted RBP2.74□□□□□ -1.97
MCF2-204ENST00000414978 TTI2Q6NXR4 508 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 ZCCHC12Q6PEW1 402 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 SLC2A7Q6PXP3 512 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 RNF144BQ7Z419 303 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 EPHX4Q8IUS5 362 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 DNAJC10Q8IXB1 793 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 CLEC4CQ8WTT0 213 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 THAP4Q8WY91 577 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 TFAP2CQ92754 450 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 LRRC37BQ96QE4 947 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 EDEM3Q9BZQ6 932 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 TNFRSF12AQ9NP84 129 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 DLL4Q9NR61 685 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 SORCS3Q9UPU3 1222 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 ZFP37Q9Y6Q3 630 aaPredicted RBP2.74□□□□□ -1.97
MCF2-204ENST00000414978 ATAD5Q96QE3 1844 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 A0A1B0GTL3 188 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 ERVV-1B6SEH8 477 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.74□□□□□ -1.97
MCF2-204ENST00000414978 H0Y626 953 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 KIAA0355O15063 1070 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 HMOX1P09601 288 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 CYP2C8P10632 490 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 LAMP2P13473 410 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 ENDOUP21128 410 aaKnown RBP2.74□□□□□ -1.97
MCF2-204ENST00000414978 FAM3BP58499 235 aaPredicted RBP2.74□□□□□ -1.97
MCF2-204ENST00000414978 VAMP2P63027 116 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 DUSP8Q13202 625 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 TBR1Q16650 682 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 CAVIN1Q6NZI2 390 aaKnown RBP2.74□□□□□ -1.97
MCF2-204ENST00000414978 KLHL24Q6TFL4 600 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 MPZL3Q6UWV2 235 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 SZRD1Q7Z422 152 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 PXKQ7Z7A4 578 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 ADGRG6Q86SQ4 1221 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 LINC00346Q8IVM7 164 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 AGBL3Q8NEM8 1001 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 FAM84AQ96KN4 292 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 PWWP2AQ96N64 755 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 KLHL32Q96NJ5 620 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 FMNL2Q96PY5 1086 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 HIST1H2AAQ96QV6 131 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 EYA3Q99504 573 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 CXorf36Q9H7Y0 433 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 C19orf73Q9NVV2 129 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 TBC1D14Q9P2M4 693 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 ABCC12Q96J65 1359 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 A0A1W2PRX2 142 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 VWA3AA6NCI4 1184 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 HNRNPRO43390 633 aaKnown RBP2.74□□□□□ -1.97
MCF2-204ENST00000414978 PROCP04070 461 aa2.74□□□□□ -1.97
MCF2-204ENST00000414978 UBL4AP11441 157 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms