RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 HOXB9P17482 250 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 PRPH2P23942 346 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 PNPLA4P41247 253 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 PAPOLAP51003 745 aaKnown RBP4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 CDK18Q07002 472 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 SEMA3AQ14563 771 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 GPR162Q16538 588 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 SLC9C1Q4G0N8 1177 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 LIPMQ5VYY2 423 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 CPXCR1Q8N123 301 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 TMEM57Q8N5G2 664 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 PIGOQ8TEQ8 1089 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 AFG1LQ8WV93 481 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 ARRDC3Q96B67 414 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 ZSCAN31Q96LW9 406 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 CHODLQ9H9P2 273 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 PLEKHA2Q9HB19 425 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 MOV10Q9HCE1 1003 aaKnown RBP4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 NRIP3Q9NQ35 241 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 PI4KBQ9UBF8 816 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 DTX4Q9Y2E6 619 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 DERAQ9Y315 318 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 PKP3Q9Y446 797 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 MYO15BQ96JP2 1530 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 LMTK3Q96Q04 1460 aa4.24□□□□□ -1.73
HMGB1P11-201ENST00000413899 KRT38O76015 456 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 CNPP09543 421 aaKnown RBP4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 ACP5P13686 325 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 ARHGAP25P42331 645 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 SRSF1Q07955 248 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 PDCLQ13371 301 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 BIRC3Q13489 604 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 STIM1Q13586 685 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 THOC5Q13769 683 aaKnown RBP4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 PGM5Q15124 567 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 SRSF7Q16629 238 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 MTX3Q5HYI7 312 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 ZNF484Q5JVG2 852 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 KIAA1755Q5JYT7 1200 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 VWA5B1Q5TIE3 1220 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 ANKRD45Q5TZF3 282 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 ZNF626Q68DY1 528 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 CYP26C1Q6V0L0 522 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 FAM57BQ71RH2 274 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 C2CD5Q86YS7 1000 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 ARL14EPQ8N8R7 260 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 USP38Q8NB14 1042 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 CUL5Q93034 780 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 COQ8BQ96D53 544 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 CLMNQ96JQ2 1002 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 PYM1Q9BRP8 204 aaKnown RBP4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 PIMREGQ9BSJ6 248 aa4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 OSBPL5Q9H0X9 879 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 PAPOLBQ9NRJ5 636 aaKnown RBP4.23□□□□□ -1.73
HMGB1P11-201ENST00000413899 NPIPB13A6NJU9 1138 aa4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 NPIPB5A8MRT5 1133 aa4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 KCNU1A8MYU2 1149 aa4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 NPIPB4C9JG80 1138 aa4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 OVOL3O00110 214 aa4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 TLR2O60603 784 aa4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 TNNT1P13805 278 aa4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 PPM1FP49593 454 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 OAZ1P54368 228 aa4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 ID2Q02363 134 aa4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 ALKBH1Q13686 389 aaKnown RBP4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 TRIP6Q15654 476 aaKnown RBP4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 CTXN3Q4LDR2 81 aa4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 TMEM200AQ86VY9 491 aa4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 ZNF354CQ86Y25 554 aa4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 SMAP1Q8IYB5 467 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 VOPP1Q96AW1 172 aa4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 TWNKQ96RR1 684 aa4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 HERC2P3Q9BVR0 1158 aa4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 IL21RQ9HBE5 538 aa4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 TMEM45AQ9NWC5 275 aa4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 IPO11Q9UI26 975 aaKnown RBP4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 DNAJC16Q9Y2G8 782 aa4.22□□□□□ -1.73
HMGB1P11-201ENST00000413899 F8W810 466 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 EIF3FO00303 357 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 WNT1P04628 370 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 CSF1P09603 554 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 PKMP14618 531 aaKnown RBP4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 STAT1P42224 750 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 ABCG1P45844 678 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 CPA2P48052 419 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 RHAGQ02094 409 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 LRRC24Q50LG9 513 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 CBWD5Q5RIA9 395 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 C10orf76Q5T2E6 689 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 C10orf25Q5T742 122 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 ISM2Q6H9L7 571 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 SLC2A7Q6PXP3 512 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 LRIG3Q6UXM1 1119 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 GALNT7Q86SF2 657 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 CNGA4Q8IV77 575 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 SCN4BQ8IWT1 228 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 CEP70Q8NHQ1 597 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 FAM110DQ8TAY7 271 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 PPM1EQ8WY54 764 aa4.21□□□□□ -1.74
HMGB1P11-201ENST00000413899 HERVK_113Q902F9 699 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms