RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 SFSWAPQ12872 951 aaKnown RBP17.35■□□□□ 0.37
COL6A2-205ENST00000413758 CT47A1Q5JQC4 288 aaPredicted RBP17.35■□□□□ 0.37
COL6A2-205ENST00000413758 SMYD5Q6GMV2 418 aa17.35■□□□□ 0.37
COL6A2-205ENST00000413758 SND1Q7KZF4 910 aaKnown RBP eCLIP17.35■□□□□ 0.37
COL6A2-205ENST00000413758 SLC26A9Q7LBE3 791 aa17.35■□□□□ 0.37
COL6A2-205ENST00000413758 MSANTD4Q8NCY6 345 aa17.35■□□□□ 0.37
COL6A2-205ENST00000413758 MRGPRX3Q96LB0 322 aa17.35■□□□□ 0.37
COL6A2-205ENST00000413758 ZDHHC5Q9C0B5 715 aa17.35■□□□□ 0.37
COL6A2-205ENST00000413758 SIK2Q9H0K1 926 aa17.35■□□□□ 0.37
COL6A2-205ENST00000413758 RSPH9Q9H1X1 276 aaPredicted RBP17.35■□□□□ 0.37
COL6A2-205ENST00000413758 VPS16Q9H269 839 aa17.35■□□□□ 0.37
COL6A2-205ENST00000413758 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.35■□□□□ 0.37
COL6A2-205ENST00000413758 PCDHB9Q9Y5E1 797 aa17.35■□□□□ 0.37
COL6A2-205ENST00000413758 ASCC3Q8N3C0 2202 aaKnown RBP17.35■□□□□ 0.37
COL6A2-205ENST00000413758 EDDM13A0A1B0GTR0 161 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 A0A1B0GVM2 712 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 TCAF2A6NFQ2 919 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 UCHL3P15374 230 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 SULT1E1P49888 294 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 OXCT1P55809 520 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 SHC2P98077 582 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 CENPCQ03188 943 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 SLC12A1Q13621 1099 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 ST3GAL2Q16842 350 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 FAM102AQ5T9C2 384 aaPredicted RBP17.34■□□□□ 0.37
COL6A2-205ENST00000413758 FBXL22Q6P050 247 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 ERICH1Q86X53 443 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 ZDHHC17Q8IUH5 632 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 MMAAQ8IVH4 418 aaKnown RBP17.34■□□□□ 0.37
COL6A2-205ENST00000413758 MYO19Q96H55 970 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 PCDH15Q96QU1 1955 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 PRMT1Q99873 361 aaKnown RBP17.34■□□□□ 0.37
COL6A2-205ENST00000413758 OMDQ99983 421 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 PABPC3Q9H361 631 aaKnown RBP17.34■□□□□ 0.37
COL6A2-205ENST00000413758 SGK2Q9HBY8 427 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 DNAAF2Q9NVR5 837 aaKnown RBP17.34■□□□□ 0.37
COL6A2-205ENST00000413758 FBXL12Q9NXK8 326 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 RRN3Q9NYV6 651 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 SLCO3A1Q9UIG8 710 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 VANGL2Q9ULK5 521 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 STAP1Q9ULZ2 295 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 SCML1Q9UN30 329 aa17.34■□□□□ 0.37
COL6A2-205ENST00000413758 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.33■□□□□ 0.36
COL6A2-205ENST00000413758 TARSL2A2RTX5 802 aaKnown RBP17.33■□□□□ 0.36
COL6A2-205ENST00000413758 UPK3BL1B0FP48 263 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 UPK3BL2E5RIL1 263 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 GOLGA6L22H0YM25 854 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 GOLGA8SH3BPF8 625 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 MID1O15344 667 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 PAGE1O75459 146 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 RNASEH2AO75792 299 aaKnown RBP17.33■□□□□ 0.36
COL6A2-205ENST00000413758 MZF1P28698 734 aaPredicted RBP17.33■□□□□ 0.36
COL6A2-205ENST00000413758 RDXP35241 583 aaKnown RBP17.33■□□□□ 0.36
COL6A2-205ENST00000413758 GGCXP38435 758 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 MATKP42679 507 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 PSMD8P48556 350 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 CSNK1EP49674 416 aaKnown RBP17.33■□□□□ 0.36
COL6A2-205ENST00000413758 STK19P49842 368 aaPredicted RBP17.33■□□□□ 0.36
COL6A2-205ENST00000413758 SULT2A1Q06520 285 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 MTA1Q13330 715 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 ZNF177Q13360 481 aaPredicted RBP17.33■□□□□ 0.36
COL6A2-205ENST00000413758 EIF4EBP2Q13542 120 aaPredicted RBP17.33■□□□□ 0.36
COL6A2-205ENST00000413758 AUHQ13825 339 aaKnown RBP17.33■□□□□ 0.36
COL6A2-205ENST00000413758 TEAD4Q15561 434 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 CST6Q15828 149 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 FKBP15Q5T1M5 1219 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 C9orf64Q5T6V5 341 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 PIP4P1Q86T03 277 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 STK40Q8N2I9 435 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 KDM1BQ8NB78 822 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 ZNF397Q8NF99 534 aaPredicted RBP17.33■□□□□ 0.36
COL6A2-205ENST00000413758 IGSF8Q969P0 613 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 C18orf8Q96DM3 657 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 PCMTD1Q96MG8 357 aaPredicted RBP17.33■□□□□ 0.36
COL6A2-205ENST00000413758 PPP1R9BQ96SB3 815 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 WDCPQ9H6R7 721 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 GAREM1Q9H706 876 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 SLC25A13Q9UJS0 675 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.33■□□□□ 0.36
COL6A2-205ENST00000413758 HS3ST4Q9Y661 456 aa17.33■□□□□ 0.36
COL6A2-205ENST00000413758 A0A1B0GVT2 93 aa17.32■□□□□ 0.36
COL6A2-205ENST00000413758 A0A1W2PP55 124 aa17.32■□□□□ 0.36
COL6A2-205ENST00000413758 SH3BP5O60239 455 aa17.32■□□□□ 0.36
COL6A2-205ENST00000413758 CER1O95813 267 aa17.32■□□□□ 0.36
COL6A2-205ENST00000413758 CD59P13987 128 aa17.32■□□□□ 0.36
COL6A2-205ENST00000413758 SPINK2P20155 84 aa17.32■□□□□ 0.36
COL6A2-205ENST00000413758 SLC8A1P32418 973 aa17.32■□□□□ 0.36
COL6A2-205ENST00000413758 AFF3P51826 1226 aaKnown RBP17.32■□□□□ 0.36
COL6A2-205ENST00000413758 DEUP1Q05D60 604 aa17.32■□□□□ 0.36
COL6A2-205ENST00000413758 SLC14A1Q13336 389 aa17.32■□□□□ 0.36
COL6A2-205ENST00000413758 ACCSLQ4AC99 568 aa17.32■□□□□ 0.36
COL6A2-205ENST00000413758 DPY19L2P1Q6NXN4 242 aa17.32■□□□□ 0.36
COL6A2-205ENST00000413758 SASS6Q6UVJ0 657 aa17.32■□□□□ 0.36
COL6A2-205ENST00000413758 IL27RAQ6UWB1 636 aa17.32■□□□□ 0.36
COL6A2-205ENST00000413758 CLEC17AQ6ZS10 378 aa17.32■□□□□ 0.36
COL6A2-205ENST00000413758 USP30Q70CQ3 517 aa17.32■□□□□ 0.36
COL6A2-205ENST00000413758 ADAT2Q7Z6V5 191 aaKnown RBP17.32■□□□□ 0.36
COL6A2-205ENST00000413758 ENOX1Q8TC92 643 aaKnown RBP17.32■□□□□ 0.36
COL6A2-205ENST00000413758 BIRC7Q96CA5 298 aa17.32■□□□□ 0.36
COL6A2-205ENST00000413758 STK33Q9BYT3 514 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms