RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	DONSON	Q9NYP3	566 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	MPP6	Q9NZW5	540 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	FBXO10	Q9UK96	956 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	NDRG2	Q9UN36	371 aa	Known RBP	13.55	□□□□□ -0.24
SF1-206	ENST00000413725	SLC27A6	Q9Y2P4	619 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	HYOU1	Q9Y4L1	999 aa		13.55	□□□□□ -0.24
SF1-206	ENST00000413725	CKAP5	Q14008	2032 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	NCAM2	O15394	837 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	DAPK3	O43293	454 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	PALM	O75781	387 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	CNTN5	O94779	1100 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	KAT7	O95251	611 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	RHOQ	P17081	205 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	CD72	P21854	359 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	OR1E1	P30953	314 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	HOXC13	P31276	330 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	GRIA2	P42262	883 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	MAPKAPK2	P49137	400 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	IRAK1	P51617	712 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	LRRC32	Q14392	662 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	ALF	Q53S48	1182 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	TMEM196	Q5HYL7	178 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	C6orf118	Q5T5N4	469 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	NAIF1	Q69YI7	327 aa	Predicted RBP	13.54	□□□□□ -0.24
SF1-206	ENST00000413725	PEX26	Q7Z412	305 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	ANKS1B	Q7Z6G8	1248 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	TFAP2D	Q7Z6R9	452 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	SETD3	Q86TU7	594 aa	Predicted RBP	13.54	□□□□□ -0.24
SF1-206	ENST00000413725	LRRC57	Q8N9N7	239 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	TERB1	Q8NA31	727 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	KCTD6	Q8NC69	237 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	CCDC26	Q8TAB7	109 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	WFIKKN2	Q8TEU8	576 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	PCDH18	Q9HCL0	1135 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	LTB4R2	Q9NPC1	389 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.54	□□□□□ -0.24
SF1-206	ENST00000413725	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.54	□□□□□ -0.24
SF1-206	ENST00000413725	AMFR	Q9UKV5	643 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.54	□□□□□ -0.24	1e-8	■□□□□ 11.1
SF1-206	ENST00000413725	CAPN6	Q9Y6Q1	641 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	CACNA1I	Q9P0X4	2223 aa		13.54	□□□□□ -0.24
SF1-206	ENST00000413725	TBC1D3B	A6NDS4	549 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	GOLGA6L9	A6NEM1	432 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	DLL1	O00548	723 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	KRT1	P04264	644 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	RHOC	P08134	193 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	CISD3	P0C7P0	127 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	PABPC1	P11940	636 aa	Known RBP	13.53	□□□□□ -0.24
SF1-206	ENST00000413725	GOT1	P17174	413 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	HLA-F	P30511	346 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	HCAR3	P49019	387 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	SLC12A1	Q13621	1099 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	FBXO43	Q4G163	708 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	DGKK	Q5KSL6	1271 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	FSTL4	Q6MZW2	842 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	RFX8	Q6ZV50	586 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	AHI1	Q8N157	1196 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	PHTF2	Q8N3S3	785 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
SF1-206	ENST00000413725	RTL3	Q8N8U3	475 aa	Known RBP	13.53	□□□□□ -0.24
SF1-206	ENST00000413725	FLCN	Q8NFG4	579 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	WFDC5	Q8TCV5	224 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	UBE2Q2	Q8WVN8	375 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	CALN1	Q9BXU9	219 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	OSBPL6	Q9BZF3	934 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	FOXQ1	Q9C009	403 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	ABCB8	Q9NUT2	735 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	KLHL11	Q9NVR0	708 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	TMEM248	Q9NWD8	314 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	GGA2	Q9UJY4	613 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	CLEC4E	Q9ULY5	219 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	NEU3	Q9UQ49	428 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	TBC1D30	Q9Y2I9	924 aa		13.53	□□□□□ -0.24
SF1-206	ENST00000413725	CCDC66	A2RUB6	948 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	LRRD1	A4D1F6	860 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	SHISA7	A6NL88	538 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	FAM170B	A6NMN3	283 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	WASH4P	A8MWX3	477 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	MIF4GD	A9UHW6	222 aa	Known RBP	13.52	□□□□□ -0.25
SF1-206	ENST00000413725	TRIM24	O15164	1050 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	EGF	P01133	1207 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	TARS	P26639	723 aa	Known RBP	13.52	□□□□□ -0.25
SF1-206	ENST00000413725	CTNNA1	P35221	906 aa	Known RBP	13.52	□□□□□ -0.25
SF1-206	ENST00000413725	ETFB	P38117	255 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	TNFRSF4	P43489	277 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	ARSE	P51690	589 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	LMAN2	Q12907	356 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	DMC1	Q14565	340 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	EIF4H	Q15056	248 aa	Known RBP	13.52	□□□□□ -0.25
SF1-206	ENST00000413725	E2F5	Q15329	346 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	ATP13A4	Q4VNC1	1196 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	FSCB	Q5H9T9	825 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	ARTN	Q5T4W7	220 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	ASTL	Q6HA08	431 aa	Predicted RBP	13.52	□□□□□ -0.25
SF1-206	ENST00000413725	CXorf57	Q6NSI4	855 aa	Known RBP	13.52	□□□□□ -0.25
SF1-206	ENST00000413725	ZNF783	Q6ZMS7	281 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	NT5DC3	Q86UY8	548 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	NLRP14	Q86W24	1093 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	VSIG1	Q86XK7	387 aa		13.52	□□□□□ -0.25
SF1-206	ENST00000413725	UBL4B	Q8N7F7	174 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms