RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 MFN1Q8IWA4 741 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 GRAMD1CQ8IYS0 662 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 FAM181AQ8N9Y4 354 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 ANKRD52Q8NB46 1076 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 SPDYE1Q8NFV5 336 aaPredicted RBP9.92□□□□□ -0.82
RFFL-203ENST00000413582 EDEM1Q92611 657 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 TTC9Q92623 222 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 NAF1Q96HR8 494 aaKnown RBP9.92□□□□□ -0.82
RFFL-203ENST00000413582 HEXIM2Q96MH2 286 aaKnown RBP9.92□□□□□ -0.82
RFFL-203ENST00000413582 PRICKLE1Q96MT3 831 aaPredicted RBP9.92□□□□□ -0.82
RFFL-203ENST00000413582 ZNF578Q96N58 590 aaPredicted RBP9.92□□□□□ -0.82
RFFL-203ENST00000413582 CPNE5Q9HCH3 593 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 INTS6Q9UL03 887 aaKnown RBP9.92□□□□□ -0.82
RFFL-203ENST00000413582 TPX2Q9ULW0 747 aaKnown RBP9.92□□□□□ -0.82
RFFL-203ENST00000413582 AHCTF1Q8WYP5 2266 aa9.92□□□□□ -0.82
RFFL-203ENST00000413582 TLN1Q9Y490 2541 aaKnown RBP9.92□□□□□ -0.82
RFFL-203ENST00000413582 COL27A1Q8IZC6 1860 aaPredicted RBP9.91□□□□□ -0.82
RFFL-203ENST00000413582 DOPEY2Q9Y3R5 2298 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 ITIH6Q6UXX5 1313 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 YJEFN3A6XGL0 299 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 TTC34A8MYJ7 566 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 B8ZZF3 427 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 E7ENQ6 273 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 TRIM38O00635 465 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 PDXKO00764 312 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 XPO1O14980 1071 aaKnown RBP9.91□□□□□ -0.82
RFFL-203ENST00000413582 MAPK13O15264 365 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 SDC3O75056 442 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 DXOO77932 396 aaKnown RBP9.91□□□□□ -0.82
RFFL-203ENST00000413582 ASLP04424 464 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 SLC8A1P32418 973 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 AFMP43652 599 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 PSMD8P48556 350 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 RAD23BP54727 409 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 ADIGQ0VDE8 80 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 SFSWAPQ12872 951 aaKnown RBP9.91□□□□□ -0.82
RFFL-203ENST00000413582 LY6DQ14210 128 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 GOLGA7BQ2TAP0 167 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 SLC45A4Q5BKX6 768 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 ARHGAP40Q5TG30 622 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 BROXQ5VW32 411 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 CDCP2Q5VXM1 449 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 BSPRYQ5W0U4 402 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 RESP18Q5W5W9 173 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 MSANTD2Q6P1R3 559 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 ZNF557Q8N988 423 aaPredicted RBP9.91□□□□□ -0.82
RFFL-203ENST00000413582 MFSD2AQ8NA29 543 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 KDM1BQ8NB78 822 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 OR14C36Q8NHC7 312 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 RNF139Q8WU17 664 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 SNRNP27Q8WVK2 155 aaKnown RBP9.91□□□□□ -0.82
RFFL-203ENST00000413582 TATDN2Q93075 761 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 MYEOVQ96EZ4 313 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 OMDQ99983 421 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 ANP32EQ9BTT0 268 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 IRX2Q9BZI1 471 aaPredicted RBP9.91□□□□□ -0.82
RFFL-203ENST00000413582 DNAI2Q9GZS0 605 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 GDPD2Q9HCC8 539 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 CISHQ9NSE2 258 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 FRMD4BQ9Y2L6 1034 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 KIF26BQ2KJY2 2108 aa9.91□□□□□ -0.82
RFFL-203ENST00000413582 EDDM13A0A1B0GTR0 161 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 GOLGA6L7A0A1B0GV03 622 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 TARSL2A2RTX5 802 aaKnown RBP9.9□□□□□ -0.82
RFFL-203ENST00000413582 ARHGAP6O43182 974 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 IRAK2O43187 625 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 SIGLEC6O43699 453 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 ADH1BP00325 375 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 MPOP05164 745 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 PYGBP11216 843 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 C6P13671 934 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 GOT1P17174 413 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 C5AR1P21730 350 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 CMA1P23946 247 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 MZF1P28698 734 aaPredicted RBP9.9□□□□□ -0.82
RFFL-203ENST00000413582 DRD3P35462 400 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 CTSOP43234 321 aaPredicted RBP9.9□□□□□ -0.82
RFFL-203ENST00000413582 METAP1P53582 386 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 SLC8A3P57103 927 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 RPS24P62847 133 aaKnown RBP9.9□□□□□ -0.82
RFFL-203ENST00000413582 GABREP78334 506 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 E2F1Q01094 437 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 ZNF211Q13398 564 aaPredicted RBP9.9□□□□□ -0.82
RFFL-203ENST00000413582 KLHL40Q2TBA0 621 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 NADSYN1Q6IA69 706 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 INTS8Q75QN2 995 aaKnown RBP9.9□□□□□ -0.82
RFFL-203ENST00000413582 SND1Q7KZF4 910 aaKnown RBP eCLIP9.9□□□□□ -0.82
RFFL-203ENST00000413582 IQCHQ86VS3 1027 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 STK40Q8N2I9 435 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 HJURPQ8NCD3 748 aaPredicted RBP9.9□□□□□ -0.82
RFFL-203ENST00000413582 FIBINQ8TAL6 211 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 SEMA4DQ92854 862 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 FAM131CQ96AQ9 280 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 FAXDC2Q96IV6 333 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 FAM129BQ96TA1 746 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 MMRN2Q9H8L6 949 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 ASCL3Q9NQ33 180 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 RYDENQ9NUL5 291 aaKnown RBP9.9□□□□□ -0.82
RFFL-203ENST00000413582 EXOC1Q9NV70 894 aa9.9□□□□□ -0.82
RFFL-203ENST00000413582 STIM2Q9P246 746 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms