RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 A0A1W2PRU2 124 aa18.54■□□□□ 0.56
CXXC1-202ENST00000412036 RFXAPO00287 272 aa18.54■□□□□ 0.56
CXXC1-202ENST00000412036 MOSPD3O75425 235 aa18.54■□□□□ 0.56
CXXC1-202ENST00000412036 GRIA1P42261 906 aa18.54■□□□□ 0.56
CXXC1-202ENST00000412036 NTHL1P78549 312 aa18.54■□□□□ 0.56
CXXC1-202ENST00000412036 BASP1P80723 227 aaKnown RBP18.54■□□□□ 0.56
CXXC1-202ENST00000412036 NRG1Q02297 640 aaPredicted RBP18.54■□□□□ 0.56
CXXC1-202ENST00000412036 RING1Q06587 406 aa18.54■□□□□ 0.56
CXXC1-202ENST00000412036 KCNJ11Q14654 390 aa18.54■□□□□ 0.56
CXXC1-202ENST00000412036 SLC5A9Q2M3M2 681 aa18.54■□□□□ 0.56
CXXC1-202ENST00000412036 CORO1BQ9BR76 489 aa18.54■□□□□ 0.56
CXXC1-202ENST00000412036 MTIF3Q9H2K0 278 aaKnown RBP18.54■□□□□ 0.56
CXXC1-202ENST00000412036 ETNK1Q9HBU6 452 aa18.54■□□□□ 0.56
CXXC1-202ENST00000412036 MAN1C1Q9NR34 630 aa18.54■□□□□ 0.56
CXXC1-202ENST00000412036 SEPT10Q9P0V9 454 aa18.54■□□□□ 0.56
CXXC1-202ENST00000412036 RNF103O00237 685 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 AVILO75366 819 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 APOEP02649 317 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 GARSP41250 739 aaKnown RBP18.53■□□□□ 0.56
CXXC1-202ENST00000412036 CREMQ03060 361 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 AFMIDQ63HM1 303 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 KLHDC10Q6PID8 442 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 CDKL3Q8IVW4 592 aaPredicted RBP18.53■□□□□ 0.56
CXXC1-202ENST00000412036 ZNF567Q8N184 647 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.53■□□□□ 0.56
CXXC1-202ENST00000412036 NKX2-4Q9H2Z4 354 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 CDC42EP4Q9H3Q1 356 aaKnown RBP18.53■□□□□ 0.56
CXXC1-202ENST00000412036 RAB6BQ9NRW1 208 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 ATP8B1O43520 1251 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 OLFM2O95897 454 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 ERVK-21P61565 698 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 PPIDQ08752 370 aaKnown RBP18.53■□□□□ 0.56
CXXC1-202ENST00000412036 ANKRD20A2Q5SQ80 823 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 ANKRD20A1Q5TYW2 823 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 ANKRD20A3Q5VUR7 823 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 HEATR6Q6AI08 1181 aaKnown RBP18.53■□□□□ 0.56
CXXC1-202ENST00000412036 KRT222Q8N1A0 295 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 RTL3Q8N8U3 475 aaKnown RBP18.53■□□□□ 0.56
CXXC1-202ENST00000412036 MAB21L3Q8N8X9 362 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 GDPD5Q8WTR4 605 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 UBLCP1Q8WVY7 318 aaPredicted RBP18.53■□□□□ 0.56
CXXC1-202ENST00000412036 GDF15Q99988 308 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 EMILIN2Q9BXX0 1053 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 NACA2Q9H009 215 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 AGO1Q9UL18 857 aaKnown RBP18.53■□□□□ 0.56
CXXC1-202ENST00000412036 PLAAQ9Y263 795 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 SSX2IPQ9Y2D8 614 aa18.53■□□□□ 0.56
CXXC1-202ENST00000412036 HBS1LQ9Y450 684 aaKnown RBP18.53■□□□□ 0.56
CXXC1-202ENST00000412036 PRRC2BQ5JSZ5 2229 aaKnown RBP18.53■□□□□ 0.56
CXXC1-202ENST00000412036 DFFAO00273 331 aa18.52■□□□□ 0.56
CXXC1-202ENST00000412036 GCATO75600 419 aa18.52■□□□□ 0.56
CXXC1-202ENST00000412036 PTPN3P26045 913 aa18.52■□□□□ 0.56
CXXC1-202ENST00000412036 CORO1AP31146 461 aaKnown RBP18.52■□□□□ 0.56
CXXC1-202ENST00000412036 CD68P34810 354 aaPredicted RBP18.52■□□□□ 0.56
CXXC1-202ENST00000412036 PMS2P54278 862 aa18.52■□□□□ 0.56
CXXC1-202ENST00000412036 RPS24P62847 133 aaKnown RBP18.52■□□□□ 0.56
CXXC1-202ENST00000412036 GPM6BQ13491 265 aa18.52■□□□□ 0.56
CXXC1-202ENST00000412036 PDK1Q15118 436 aa18.52■□□□□ 0.56
CXXC1-202ENST00000412036 CCDC13Q8IYE1 715 aa18.52■□□□□ 0.56
CXXC1-202ENST00000412036 ZCCHC9Q8N567 271 aaKnown RBP18.52■□□□□ 0.56
CXXC1-202ENST00000412036 C9orf72Q96LT7 481 aa18.52■□□□□ 0.56
CXXC1-202ENST00000412036 TGS1Q96RS0 853 aaKnown RBP18.52■□□□□ 0.56
CXXC1-202ENST00000412036 VIPAS39Q9H9C1 493 aa18.52■□□□□ 0.56
CXXC1-202ENST00000412036 DNMT3BQ9UBC3 853 aaKnown RBP18.52■□□□□ 0.56
CXXC1-202ENST00000412036 HCFC2Q9Y5Z7 792 aa18.52■□□□□ 0.56
CXXC1-202ENST00000412036 C5orf60A6NFR6 353 aa18.52■□□□□ 0.55
CXXC1-202ENST00000412036 H3BNC9 293 aa18.52■□□□□ 0.55
CXXC1-202ENST00000412036 LRG1P02750 347 aa18.52■□□□□ 0.55
CXXC1-202ENST00000412036 SLC2A3P11169 496 aa18.52■□□□□ 0.55
CXXC1-202ENST00000412036 TACR2P21452 398 aa18.52■□□□□ 0.55
CXXC1-202ENST00000412036 ZNF534Q76KX8 674 aa18.52■□□□□ 0.55
CXXC1-202ENST00000412036 IGDCC3Q8IVU1 814 aa18.52■□□□□ 0.55
CXXC1-202ENST00000412036 CNTD1Q8N815 330 aa18.52■□□□□ 0.55
CXXC1-202ENST00000412036 ATP6V0D2Q8N8Y2 350 aa18.52■□□□□ 0.55
CXXC1-202ENST00000412036 TTC16Q8NEE8 873 aa18.52■□□□□ 0.55
CXXC1-202ENST00000412036 STK39Q9UEW8 545 aa18.52■□□□□ 0.55
CXXC1-202ENST00000412036 CDH22Q9UJ99 828 aa18.52■□□□□ 0.55
CXXC1-202ENST00000412036 DRGXA6NNA5 263 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 ACSL4O60488 711 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 MAFKO60675 156 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 MYL4P12829 197 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 SLC29A2Q14542 456 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 MORF4L2Q15014 288 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 KYNUQ16719 465 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 CHSY1Q86X52 802 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 VN1R2Q8NFZ6 395 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 ARL8AQ96BM9 186 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 HDAC11Q96DB2 347 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 TRIM56Q9BRZ2 755 aaKnown RBP18.51■□□□□ 0.55
CXXC1-202ENST00000412036 SLC46A2Q9BY10 475 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 CCL26Q9Y258 94 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 PCDHA11Q9Y5I1 949 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 ACTL7AQ9Y615 435 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 HACD1B0YJ81 288 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 MBL2P11226 248 aaPredicted RBP18.51■□□□□ 0.55
CXXC1-202ENST00000412036 PPIL6Q8IXY8 311 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 LGI2Q8N0V4 545 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 C12orf76Q8N812 135 aaPredicted RBP18.51■□□□□ 0.55
CXXC1-202ENST00000412036 SHKBP1Q8TBC3 707 aa18.51■□□□□ 0.55
CXXC1-202ENST00000412036 USP33Q8TEY7 942 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms