RNA–Protein interactions for RNA: ENST00000411517.2

RAB28P1-201, Transcript of RAB28, member RAS oncogene family pseudogene 1, humanhuman

BASIC

Gene RAB28P1, Length 641 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P1-201ENST00000411517 TDP1Q9NUW8 608 aa5.05□□□□□ -1.6
RAB28P1-201ENST00000411517 DUS2Q9NX74 493 aaKnown RBP5.05□□□□□ -1.6
RAB28P1-201ENST00000411517 WSB2Q9NYS7 404 aaPredicted RBP5.05□□□□□ -1.6
RAB28P1-201ENST00000411517 ERRFI1Q9UJM3 462 aaPredicted RBP5.05□□□□□ -1.6
RAB28P1-201ENST00000411517 NOB1Q9ULX3 412 aaKnown RBP5.05□□□□□ -1.6
RAB28P1-201ENST00000411517 ASB3Q9Y575 518 aa5.05□□□□□ -1.6
RAB28P1-201ENST00000411517 OBSL1O75147 1896 aa5.05□□□□□ -1.6
RAB28P1-201ENST00000411517 ZNF469Q96JG9 3925 aaPredicted RBP5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 DOCK9Q9BZ29 2069 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 KLRF2D3W0D1 207 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 H7C4K7 107 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 DDX39AO00148 427 aaKnown RBP5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 KCNK3O14649 394 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 MEIS2O14770 477 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 RNF113AO15541 343 aaKnown RBP5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 B3GAT3O94766 335 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 ERLIN2O94905 339 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 KAT7O95251 611 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 SIX3O95343 332 aaPredicted RBP5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 APODP05090 189 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 ITGA2BP08514 1039 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 IMPDH2P12268 514 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 DDX6P26196 483 aaKnown RBP eCLIP5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 AXLP30530 894 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 EIF2DP41214 584 aaKnown RBP5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 CYP4F2P78329 520 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 SRSF6Q13247 344 aaKnown RBP5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 ZNF268Q14587 947 aaPredicted RBP5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 PCBP1Q15365 356 aaKnown RBP eCLIP5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 DPY19L1Q2PZI1 675 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 ANKRD39Q53RE8 183 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 CCDC178Q5BJE1 867 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 EMC10Q5UCC4 262 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 CPZQ66K79 652 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 NOTUMQ6P988 496 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 UNC5AQ6ZN44 842 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 SRGAP1Q7Z6B7 1085 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 ITIH5Q86UX2 942 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 SMAP1Q8IYB5 467 aaPredicted RBP5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 RNF34Q969K3 372 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 TSPAN17Q96FV3 270 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 TOE1Q96GM8 510 aaKnown RBP5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 YTHDC1Q96MU7 727 aaKnown RBP5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 ACAP3Q96P50 834 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 MXRA8Q9BRK3 442 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 GPR174Q9BXC1 333 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 PCED1AQ9H1Q7 454 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 AGO4Q9HCK5 861 aaKnown RBP5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 CD93Q9NPY3 652 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 NRBP2Q9NSY0 501 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 SEPT10Q9P0V9 454 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 GULP1Q9UBP9 304 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 FBXL5Q9UKA1 691 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 EXOC6BQ9Y2D4 811 aa5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 ZNF106Q9H2Y7 1883 aaKnown RBP5.04□□□□□ -1.6
RAB28P1-201ENST00000411517 MXRA5Q9NR99 2828 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 IGKV6-21A0A0C4DH24 114 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 A0A1W2PNU3 283 aaPredicted RBP5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 A0A1W2PQF6 199 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 MYMKA6NI61 221 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 SYN3O14994 580 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 TSPAN3O60637 253 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 NFATC1O95644 943 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 THP07101 528 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 PCP11498 1178 aaKnown RBP5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 AKAP5P24588 427 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 SMARCA1P28370 1054 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 PTGER4P35408 488 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 TNFRSF4P43489 277 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 ALDH1A3P47895 512 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 MRPL58Q14197 206 aaKnown RBP5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 LACTB2Q53H82 288 aaPredicted RBP5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 HSP90AB4PQ58FF6 505 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 MANEAQ5SRI9 462 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 TMCO4Q5TGY1 634 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 ADAT2Q7Z6V5 191 aaKnown RBP5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 DNAJB7Q7Z6W7 309 aaPredicted RBP5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 CPNE8Q86YQ8 564 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 SFTPA1Q8IWL2 248 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 EFCAB13Q8IY85 973 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 KBTBD3Q8NAB2 608 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 SLC16A11Q8NCK7 471 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 BEST2Q8NFU1 509 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 ADAMTS17Q8TE56 1095 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 PRR11Q96HE9 360 aaPredicted RBP5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 MRGPRX1Q96LB2 322 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 C5orf34Q96MH7 638 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 PIGSQ96S52 555 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 PNKPQ96T60 521 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 ELF4Q99607 663 aaPredicted RBP5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 TM9SF2Q99805 663 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 CD248Q9HCU0 757 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 ZDHHC4Q9NPG8 344 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 USP36Q9P275 1121 aaKnown RBP5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 SUCLA2Q9P2R7 463 aaPredicted RBP5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 FBLN5Q9UBX5 448 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 NUMA1Q14980 2115 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 MAP1AP78559 2803 aaPredicted RBP5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 ABCA4P78363 2273 aa5.03□□□□□ -1.6
RAB28P1-201ENST00000411517 MYOFQ9NZM1 2061 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms