RNA–Protein interactions for RNA: ENST00000410628.1

RNU4-43P-201, Transcript of RNA, U4 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU4-43P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-43P-201ENST00000410628 DDX56Q9NY93 547 aaKnown RBP1.68□□□□□ -2.14
RNU4-43P-201ENST00000410628 IGSF9Q9P2J2 1179 aa1.68□□□□□ -2.14
RNU4-43P-201ENST00000410628 ZNF180Q9UJW8 692 aa1.68□□□□□ -2.14
RNU4-43P-201ENST00000410628 NOB1Q9ULX3 412 aaKnown RBP1.68□□□□□ -2.14
RNU4-43P-201ENST00000410628 PCDHB7Q9Y5E2 793 aa1.68□□□□□ -2.14
RNU4-43P-201ENST00000410628 SNED1Q8TER0 1413 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 TP53BP1Q12888 1972 aaPredicted RBP1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 STMND1H3BQB6 276 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 M0QYT0 321 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 MSI1O43347 362 aaKnown RBP1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 MARCH6O60337 910 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 APOHP02749 345 aaPredicted RBP1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 GSTM5P46439 218 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 GLIPR1P48060 266 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 PPP3CCP48454 512 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 RASSF2P50749 326 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 RAB27AP51159 221 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 SEC61A1P61619 476 aaKnown RBP1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 ZNF284Q2VY69 593 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 ARHGAP15Q53QZ3 475 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 TDRD12Q587J7 1177 aaKnown RBP1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 KLHDC7AQ5VTJ3 777 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 ADAM5Q6NVV9 412 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 KLHDC8BQ8IXV7 354 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 ADGRF3Q8IZF5 1079 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 RFLNBQ8N5W9 214 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 EXD3Q8N9H8 876 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 IL17RCQ8NAC3 791 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 MIGA1Q8NAN2 632 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 KDM1BQ8NB78 822 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 ZNF485Q8NCK3 441 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 OR14A16Q8NHC5 309 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 NEK9Q8TD19 979 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 ABHD5Q8WTS1 349 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 MCRS1Q96EZ8 462 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 CLMNQ96JQ2 1002 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 EIF3CQ99613 913 aaKnown RBP1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 EPYCQ99645 322 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 APOL5Q9BWW9 433 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 LDHAL6BQ9BYZ2 381 aaPredicted RBP1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 CATSPERBQ9H7T0 1116 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 PCDH12Q9NPG4 1184 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 DDX20Q9UHI6 824 aaKnown RBP1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 CAPN11Q9UMQ6 739 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 L1RE1Q9UN81 338 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 PAXBP1Q9Y5B6 917 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 COL4A3BPQ9Y5P4 624 aa1.67□□□□□ -2.14
RNU4-43P-201ENST00000410628 ISM1B1AKI9 464 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 PRAC2D3DTV9 90 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 KCNQ3O43525 872 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 LDB2O43679 373 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 KRT36O76013 467 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 INMTO95050 263 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 ALDOCP09972 364 aaKnown RBP1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 MYF5P13349 255 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 TGM2P21980 687 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 MMP8P22894 467 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 ZP1P60852 638 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 TUBA1BP68363 451 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 MCL1Q07820 350 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 DSC1Q08554 894 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 ILF3Q12906 894 aaKnown RBP eCLIP1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 PIN1Q13526 163 aaPredicted RBP1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 HLFQ16534 295 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 DUSP6Q16828 381 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 GLE1Q53GS7 698 aaKnown RBP1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 ALG10Q5BKT4 473 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 ALG10BQ5I7T1 473 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 LCE3EQ5T5B0 92 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 RAP1GAP2Q684P5 730 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 RNF44Q7L0R7 432 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 KRT27Q7Z3Y8 459 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 MDGA2Q7Z553 956 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 KRTAP7-1Q8IUC3 87 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 DCUN1D3Q8IWE4 304 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 CLASRPQ8N2M8 674 aaKnown RBP1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 PAQR4Q8N4S7 273 aaPredicted RBP1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 SLC25A41Q8N5S1 370 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 TMEM217Q8N7C4 229 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 FAM156AQ8NDB6 213 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 GLMPQ8WWB7 406 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 NPIPB3Q92617 1050 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 RUNDC1Q96C34 613 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 AIFM3Q96NN9 605 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 PGLYRP2Q96PD5 576 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 B3GNT4Q9C0J1 378 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 TMEM60Q9H2L4 133 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 ERVK-5Q9HDB9 667 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 PNRC2Q9NPJ4 139 aaKnown RBP1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 HEYLQ9NQ87 328 aaPredicted RBP1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 PRDM11Q9NQV5 511 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 PNMA8BQ9ULN7 279 aaPredicted RBP1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 LMTK3Q96Q04 1460 aa1.66□□□□□ -2.14
RNU4-43P-201ENST00000410628 SAA2-SAA4A0A096LPE2 208 aa1.65□□□□□ -2.15
RNU4-43P-201ENST00000410628 IGLV5-52A0A0A0MRZ9 124 aa1.65□□□□□ -2.15
RNU4-43P-201ENST00000410628 IGKV3D-20A0A0C4DH25 116 aa1.65□□□□□ -2.15
RNU4-43P-201ENST00000410628 GAGE12JA6NER3 117 aa1.65□□□□□ -2.15
RNU4-43P-201ENST00000410628 MS4A18H0YCH9 400 aa1.65□□□□□ -2.15
RNU4-43P-201ENST00000410628 CCNT2O60583 730 aaKnown RBP1.65□□□□□ -2.15
RNU4-43P-201ENST00000410628 KCNJ13O60928 360 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms