RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 C18orf25Q96B23 403 aaPredicted RBP17.09■□□□□ 0.33
LIMS2-208ENST00000410011 TNIP3Q96KP6 325 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 ZNF560Q96MR9 790 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 HNRNPABQ99729 332 aaKnown RBP17.09■□□□□ 0.33
LIMS2-208ENST00000410011 LPIN3Q9BQK8 851 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 BRD8Q9H0E9 1235 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 CDH19Q9H159 772 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 CLGNO14967 610 aa17.08■□□□□ 0.33
LIMS2-208ENST00000410011 PEX1O43933 1283 aa17.08■□□□□ 0.33
LIMS2-208ENST00000410011 AP2A1O95782 977 aa17.08■□□□□ 0.33
LIMS2-208ENST00000410011 ERVK-10P10266 1014 aa17.08■□□□□ 0.33
LIMS2-208ENST00000410011 LMO2P25791 158 aa17.08■□□□□ 0.33
LIMS2-208ENST00000410011 HADHAP40939 763 aa17.08■□□□□ 0.33
LIMS2-208ENST00000410011 ITGA9Q13797 1035 aa17.08■□□□□ 0.33
LIMS2-208ENST00000410011 CCNIQ14094 377 aa17.08■□□□□ 0.33
LIMS2-208ENST00000410011 OTUD1Q5VV17 481 aaPredicted RBP17.08■□□□□ 0.33
LIMS2-208ENST00000410011 NOTUMQ6P988 496 aa17.08■□□□□ 0.33
LIMS2-208ENST00000410011 ACAD11Q709F0 780 aa17.08■□□□□ 0.33
LIMS2-208ENST00000410011 FBXW8Q8N3Y1 598 aa17.08■□□□□ 0.33
LIMS2-208ENST00000410011 NME8Q8N427 588 aa17.08■□□□□ 0.33
LIMS2-208ENST00000410011 DCLK2Q8N568 766 aa17.08■□□□□ 0.33
LIMS2-208ENST00000410011 SREK1Q8WXA9 508 aaKnown RBP17.08■□□□□ 0.33
LIMS2-208ENST00000410011 RTKNQ9BST9 563 aa17.08■□□□□ 0.33
LIMS2-208ENST00000410011 PPP1R12CQ9BZL4 782 aa17.08■□□□□ 0.33
LIMS2-208ENST00000410011 SNX25Q9H3E2 840 aa17.08■□□□□ 0.33
LIMS2-208ENST00000410011 STAP1Q9ULZ2 295 aa17.08■□□□□ 0.33
LIMS2-208ENST00000410011 MEI4A8MW99 385 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 CASQ2O14958 399 aaPredicted RBP17.08■□□□□ 0.32
LIMS2-208ENST00000410011 ZBTB7AO95365 584 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 PDGFRBP09619 1106 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 HCAR3P49019 387 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 ASPHQ12797 758 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 XKR4Q5GH76 650 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 RALGPS1Q5JS13 557 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 INTS6LQ5JSJ4 861 aaKnown RBP17.08■□□□□ 0.32
LIMS2-208ENST00000410011 FOXB2Q5VYV0 432 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 DEFB132Q7Z7B7 95 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.08■□□□□ 0.32
LIMS2-208ENST00000410011 PHC3Q8NDX5 983 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 SLC2A14Q8TDB8 520 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 FCRL3Q96P31 734 aaPredicted RBP17.08■□□□□ 0.32
LIMS2-208ENST00000410011 SLC2A13Q96QE2 648 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 MCMBPQ9BTE3 642 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 DUSP16Q9BY84 665 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 CASS4Q9NQ75 786 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 BFARQ9NZS9 450 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 MID2Q9UJV3 735 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 ARHGAP26Q9UNA1 814 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 POMPQ9Y244 141 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 TBC1D30Q9Y2I9 924 aa17.08■□□□□ 0.32
LIMS2-208ENST00000410011 G3V2L1 256 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 ZNF286BP0CG31 522 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 GNAT1P11488 350 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 CYP2C9P11712 490 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 ITGAXP20702 1163 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 MLH1P40692 756 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 PRKAA2P54646 552 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 CSE1LP55060 971 aaKnown RBP17.07■□□□□ 0.32
LIMS2-208ENST00000410011 MTTPP55157 894 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 GJC2Q5T442 439 aaPredicted RBP17.07■□□□□ 0.32
LIMS2-208ENST00000410011 THEMIS2Q5TEJ8 643 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 CWF19L1Q69YN2 538 aaKnown RBP17.07■□□□□ 0.32
LIMS2-208ENST00000410011 RNF111Q6ZNA4 994 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 PID1Q7Z2X4 250 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 PIGZQ86VD9 579 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 LCA5Q86VQ0 697 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 SULF1Q8IWU6 871 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 POU5F2Q8N7G0 328 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 NTAN1Q96AB6 310 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 DCPSQ96C86 337 aaKnown RBP17.07■□□□□ 0.32
LIMS2-208ENST00000410011 ZCWPW2A0A1B0GU75 182 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 RRN3P2A6NIE6 340 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 SLC22A2O15244 555 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 MAP3K13O43283 966 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 MTSS1O43312 755 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 XPOTO43592 962 aaKnown RBP17.07■□□□□ 0.32
LIMS2-208ENST00000410011 AXLP30530 894 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 CSRP3P50461 194 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 MAP3K21Q5TCX8 1036 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 KCTD11Q693B1 232 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 FSTL4Q6MZW2 842 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 ZNF467Q7Z7K2 595 aaPredicted RBP17.07■□□□□ 0.32
LIMS2-208ENST00000410011 KBTBD6Q86V97 674 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 SLC25A41Q8N5S1 370 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 CCNYQ8ND76 341 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 APPL2Q8NEU8 664 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 GTF3C2Q8WUA4 911 aaPredicted RBP17.07■□□□□ 0.32
LIMS2-208ENST00000410011 CNDP1Q96KN2 507 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 KCNK16Q96T55 309 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 EIF2AQ9BY44 585 aaKnown RBP17.07■□□□□ 0.32
LIMS2-208ENST00000410011 KLHL4Q9C0H6 718 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 KATNBL1Q9H079 304 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 COG4Q9H9E3 785 aa17.07■□□□□ 0.32
LIMS2-208ENST00000410011 HCRTO43612 131 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 TIMM44O43615 452 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 TRIM13O60858 407 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 GPR32O75388 356 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 APOA4P06727 396 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 COX4I1P13073 169 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 KCNE1P15382 129 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms