RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 UBE2FQ969M7 185 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 HIC2Q96JB3 615 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 PCIF1Q9H4Z3 704 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 SUDS3Q9H7L9 328 aaPredicted RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 POLE4Q9NR33 117 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 ZNF148Q9UQR1 794 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 USP9XQ93008 2570 aaPredicted RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 TRPM6Q9BX84 2022 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 ASB14A6NK59 587 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 F5H423 210 aaPredicted RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 TPD52L2O43399 206 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 THAP12O43422 761 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 MAN1A2O60476 641 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 FKBP6O75344 327 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 LRIG2O94898 1065 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 OXSR1O95747 527 aaPredicted RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 CST3P01034 146 aaPredicted RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 RALAP11233 206 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 ALOX15P16050 662 aaPredicted RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 NAT1P18440 290 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 FGFR3P22607 806 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 TCEA1P23193 301 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 GCLMP48507 274 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 IL1RL1Q01638 556 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 PTP4A2Q12974 167 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 HIC1Q14526 733 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 FSCN1Q16658 493 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 SMTNL2Q2TAL5 461 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 PTPN20Q4JDL3 420 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 DCAF17Q5H9S7 520 aaPredicted RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 ATXN7L2Q5T6C5 722 aaPredicted RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 METTL21CQ5VZV1 264 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 SLC9A4Q6AI14 798 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 KLHDC10Q6PID8 442 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 MFSD7Q6UXD7 560 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 RBM44Q6ZP01 1051 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 DZIP1Q86YF9 867 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 MAPKAPK5Q8IW41 473 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 UNC45BQ8IWX7 931 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 ZC3H3Q8IXZ2 948 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 HS3ST5Q8IZT8 346 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 LGI2Q8N0V4 545 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 OR9I1Q8NGQ6 314 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 OR2T34Q8NGX1 318 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 PPP1R13LQ8WUF5 828 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 OR52B2Q96RD2 323 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 HERC2P3Q9BVR0 1158 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 STRA6Q9BX79 667 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 RSPO3Q9BXY4 272 aaPredicted RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 WDR55Q9H6Y2 383 aaPredicted RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 BARHL2Q9NY43 387 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 COL20A1Q9P218 1284 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 STX18Q9P2W9 335 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 RALYQ9UKM9 306 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 DAAM1Q9Y4D1 1078 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 ST14Q9Y5Y6 855 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 KIAA1549LQ6ZVL6 1849 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 PKD1L2Q7Z442 2459 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 MYADML2A6NDP7 307 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 LTFP02788 710 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 LDHCP07864 332 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 DHRS4L1P0CG22 281 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 CSH1P0DML2 217 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 CSH2P0DML3 217 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 ITGB5P18084 799 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 CD58P19256 250 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 TUFMP49411 452 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 PDE6CP51160 858 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 ORC1Q13415 861 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 NRF1Q16656 503 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 C12orf60Q5U649 245 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 DTHD1Q6ZMT9 781 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 HEATR3Q7Z4Q2 680 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 ZBTB33Q86T24 672 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 RNF10Q8N5U6 811 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 CPSF7Q8N684 471 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 KBTBD7Q8WVZ9 684 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 PRPF31Q8WWY3 499 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 CLDN23Q96B33 292 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 ZNF689Q96CS4 500 aaPredicted RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 THTPAQ9BU02 230 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 CEP41Q9BYV8 373 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 PITPNM3Q9BZ71 974 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 ACBD3Q9H3P7 528 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 PFDN4Q9NQP4 134 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 ANLNQ9NQW6 1124 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 TMPRSS4Q9NRS4 437 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 DMAC2Q9NW81 257 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 NME7Q9Y5B8 376 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 ZFP37Q9Y6Q3 630 aaPredicted RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 VPS13DQ5THJ4 4388 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 PLXNA2O75051 1894 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 GOLGA8IPA6NC78 632 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 GOLGA8JA6NMD2 632 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 POC1B-GALNT4F8VUJ3 575 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 LRRTM2O43300 516 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 RFPL1O75677 317 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 DGKIO75912 1065 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 C1QL1O75973 258 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 MT-CO1P00395 513 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms