RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ARSEP51690 589 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 TPI1P60174 286 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 NR1H3Q13133 447 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 EML3Q32P44 896 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 MPPE1Q53F39 396 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 CCDC50Q8IVM0 306 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 LGI2Q8N0V4 545 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 CPA6Q8N4T0 437 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 HJURPQ8NCD3 748 aaPredicted RBP17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 PRSS33Q8NF86 280 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 ALG3Q92685 438 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 TBC1D31Q96DN5 1066 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 RPRD1AQ96P16 312 aaPredicted RBP17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 KCTD15Q96SI1 283 aaPredicted RBP17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 IRF2BPLQ9H1B7 796 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 CARD9Q9H257 536 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 PRDM16Q9HAZ2 1276 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 PCDH18Q9HCL0 1135 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 KLHL11Q9NVR0 708 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 DNAI1Q9UI46 699 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 VANGL2Q9ULK5 521 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 TICRRQ7Z2Z1 1910 aa17.02■□□□□ 0.31
TSPAN4-208ENST00000409531 IGLV3-10A0A075B6K4 115 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 GOLGA6L7A0A1B0GV03 622 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 KCNK3O14649 394 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 SCAMP3O14828 347 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 FGF10O15520 208 aaPredicted RBP17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 DAPK3O43293 454 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 EPHB2P29323 1055 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 CASQ1P31415 396 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 RPS9P46781 194 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 DNA2P51530 1060 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 PTPN5P54829 565 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 TCF15Q12870 199 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 DPYSL3Q14195 570 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 C5orf22Q49AR2 442 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 MPP7Q5T2T1 576 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 SEL1L2Q5TEA6 688 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 MANEALQ5VSG8 457 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 FBXL22Q6P050 247 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 RFWD3Q6PCD5 774 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 TXNDC11Q6PKC3 985 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 SYT10Q6XYQ8 523 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 RAPGEF5Q92565 580 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 RNF25Q96BH1 459 aaPredicted RBP17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 TMA16Q96EY4 203 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 PHOX2BQ99453 314 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 CATSPERBQ9H7T0 1116 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 LMAN1LQ9HAT1 526 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 SPHK2Q9NRA0 654 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 COL4A3Q01955 1670 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 KMT2EQ8IZD2 1858 aa17.01■□□□□ 0.31
TSPAN4-208ENST00000409531 FAM72CH0Y354 149 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 ADH1CP00326 375 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 ATP1A1P05023 1023 aaKnown RBP17■□□□□ 0.31
TSPAN4-208ENST00000409531 CHRNB1P11230 501 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 GOT1P17174 413 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 TCP1P17987 556 aaKnown RBP17■□□□□ 0.31
TSPAN4-208ENST00000409531 HOXC13P31276 330 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 GJA4P35212 333 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 GGCXP38435 758 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 PPP2R5EQ16537 467 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 TFDP3Q5H9I0 405 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 FAM72AQ5TYM5 149 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 FAM72DQ6L9T8 149 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 RWDD4Q6NW29 188 aaKnown RBP17■□□□□ 0.31
TSPAN4-208ENST00000409531 SPOCD1Q6ZMY3 1216 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 RFX8Q6ZV50 586 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 FAM72BQ86X60 149 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 CCDC117Q8IWD4 279 aaPredicted RBP17■□□□□ 0.31
TSPAN4-208ENST00000409531 ZNF683Q8IZ20 524 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 DDI1Q8WTU0 396 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 PBKQ96KB5 322 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 MAK16Q9BXY0 300 aaKnown RBP17■□□□□ 0.31
TSPAN4-208ENST00000409531 MAGEB5Q9BZ81 275 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 ZYG11BQ9C0D3 744 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 CWC15Q9P013 229 aaKnown RBP17■□□□□ 0.31
TSPAN4-208ENST00000409531 EFR3BQ9Y2G0 817 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 SNX10Q9Y5X0 201 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 WDFY4Q6ZS81 3184 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 COL4A2P08572 1712 aa17■□□□□ 0.31
TSPAN4-208ENST00000409531 A0A1B0GVM2 712 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 TCAF2A6NFQ2 919 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 C3orf70A6NLC5 250 aaPredicted RBP16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 DRGXA6NNA5 263 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 H0Y858 1186 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 GFRA2O00451 464 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 TRDMT1O14717 391 aaKnown RBP16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 ZNF500O60304 480 aaPredicted RBP16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 TSPAN3O60637 253 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 PRLRP16471 622 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 PTPN7P35236 360 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 TFDP2Q14188 446 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 PON2Q15165 354 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 PAPD7Q5XG87 772 aaKnown RBP16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 MFSD7Q6UXD7 560 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 TPGS1Q6ZTW0 290 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 CHST9Q7L1S5 443 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 C14orf80Q86SX3 495 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 C1orf210Q8IVY1 113 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms