RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ITPRIPL1Q6GPH6 555 aa21.23■□□□□ 0.99
USP39-203ENST00000409470 TRMT10BQ6PF06 316 aaKnown RBP21.23■□□□□ 0.99
USP39-203ENST00000409470 YTHDF3Q7Z739 585 aaKnown RBP21.23■□□□□ 0.99
USP39-203ENST00000409470 TMEM175Q9BSA9 504 aa21.23■□□□□ 0.99
USP39-203ENST00000409470 ZNF180Q9UJW8 692 aa21.23■□□□□ 0.99
USP39-203ENST00000409470 SLC27A5Q9Y2P5 690 aa21.23■□□□□ 0.99
USP39-203ENST00000409470 NUP205Q92621 2012 aa21.23■□□□□ 0.99
USP39-203ENST00000409470 FGF10O15520 208 aaPredicted RBP21.22■□□□□ 0.99
USP39-203ENST00000409470 KRT37O76014 449 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 GALTP07902 379 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 YWHAQP27348 245 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 FOXN2P32314 431 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 MGAT5BQ3V5L5 792 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 TEX44Q53QW1 395 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 LVRNQ6Q4G3 990 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 FAM43BQ6ZT52 329 aaPredicted RBP21.22■□□□□ 0.99
USP39-203ENST00000409470 VAT1Q99536 393 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 SEPT5Q99719 369 aaPredicted RBP21.22■□□□□ 0.99
USP39-203ENST00000409470 PPP1R12CQ9BZL4 782 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 SMYD2Q9NRG4 433 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 NEU3Q9UQ49 428 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 TAC1P20366 129 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 RTP2Q5QGT7 225 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 CCDC121Q6ZUS5 278 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 CCNJLQ8IV13 435 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 BANPQ8N9N5 519 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 FBXO32Q969P5 355 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 GBA3Q9H227 469 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 OGDHLQ9ULD0 1010 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 TLR6Q9Y2C9 796 aa21.22■□□□□ 0.99
USP39-203ENST00000409470 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.21■□□□□ 0.99
USP39-203ENST00000409470 MTMR11A4FU01 709 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 FAM159BA6NKW6 160 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 KCNU1A8MYU2 1149 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 H7C4K7 107 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 AP2A1O95782 977 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 JCHAINP01591 159 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 SNRPAP09012 282 aaKnown RBP21.21■□□□□ 0.99
USP39-203ENST00000409470 CCL5P13501 91 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 TUBP50607 506 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 GPR17Q13304 367 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 MSANTD2Q6P1R3 559 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 DEFB128Q7Z7B8 93 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 ATPAF2Q8N5M1 289 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 SPPL2BQ8TCT7 592 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 SERAC1Q96JX3 654 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 TMEM51Q9NW97 253 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 HS3ST4Q9Y661 456 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 SHROOM3Q8TF72 1996 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 SCN5AQ14524 2016 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 ARHGAP42A6NI28 874 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 TRIM49D1C9J1S8 452 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 SNX3O60493 162 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 LPXNO60711 386 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 RTN3O95197 1032 aaPredicted RBP21.21■□□□□ 0.99
USP39-203ENST00000409470 CSH1P0DML2 217 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 CSH2P0DML3 217 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 PGAM1P18669 254 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 NFKB1P19838 968 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 HOXC13P31276 330 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 CD68P34810 354 aaPredicted RBP21.21■□□□□ 0.99
USP39-203ENST00000409470 TBX4P57082 545 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 ITIH4Q14624 930 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 MANEALQ5VSG8 457 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 STEAP4Q687X5 459 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 RSPO2Q6UXX9 243 aaPredicted RBP21.21■□□□□ 0.99
USP39-203ENST00000409470 RNF19BQ6ZMZ0 732 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 TMEM173Q86WV6 379 aaPredicted RBP21.21■□□□□ 0.99
USP39-203ENST00000409470 CRIPAKQ8N1N5 446 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 LZTR1Q8N653 840 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 OR52K1Q8NGK4 314 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 TCP10LQ8TDR4 215 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 GORASP1Q9BQQ3 440 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 NAT9Q9BTE0 207 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 SYBUQ9NX95 663 aa21.21■□□□□ 0.99
USP39-203ENST00000409470 E9PAM4 449 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 TM9SF1O15321 606 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 UGT1A9O60656 530 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 SLC2A3P11169 496 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 PYGBP11216 843 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 ZNF33AQ06730 810 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 EFEMP1Q12805 493 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 OLIG2Q13516 323 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 ANKS3Q6ZW76 656 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 LRRC43Q8N309 656 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 TEKT5Q96M29 485 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 TTPALQ9BTX7 342 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 UGT1A7Q9HAW7 530 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 UGT1A10Q9HAW8 530 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 UGT1A8Q9HAW9 530 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 MOCS1Q9NZB8 636 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 IL37Q9NZH6 218 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 GRID1Q9ULK0 1009 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 PLXNA3P51805 1871 aa21.2■□□□□ 0.98
USP39-203ENST00000409470 USP12O75317 370 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 KRT38O76015 456 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 UPP2O95045 317 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 PDK4Q16654 411 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 CYS1Q717R9 158 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 TAS1R1Q7RTX1 841 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms