RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 FAM133BQ5BKY9 247 aaKnown RBP17.3■□□□□ 0.36
CHMP3-203ENST00000409225 MPP7Q5T2T1 576 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 STK40Q8N2I9 435 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 CARNMT1Q8N4J0 409 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 ZNF557Q8N988 423 aaPredicted RBP17.3■□□□□ 0.36
CHMP3-203ENST00000409225 FIBINQ8TAL6 211 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 TTC9Q92623 222 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 TATDN2Q93075 761 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 FAM129BQ96TA1 746 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 ZSCAN16Q9H4T2 348 aaPredicted RBP17.3■□□□□ 0.36
CHMP3-203ENST00000409225 CISHQ9NSE2 258 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 EXOC1Q9NV70 894 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 TPX2Q9ULW0 747 aaKnown RBP17.3■□□□□ 0.36
CHMP3-203ENST00000409225 ERVW-1Q9UQF0 538 aa17.3■□□□□ 0.36
CHMP3-203ENST00000409225 TARSL2A2RTX5 802 aaKnown RBP17.29■□□□□ 0.36
CHMP3-203ENST00000409225 KLRC4O43908 158 aa17.29■□□□□ 0.36
CHMP3-203ENST00000409225 WISP1O95388 367 aa17.29■□□□□ 0.36
CHMP3-203ENST00000409225 ADH1BP00325 375 aa17.29■□□□□ 0.36
CHMP3-203ENST00000409225 PDIA4P13667 645 aaKnown RBP17.29■□□□□ 0.36
CHMP3-203ENST00000409225 SLC11A2P49281 568 aa17.29■□□□□ 0.36
CHMP3-203ENST00000409225 ZNF211Q13398 564 aaPredicted RBP17.29■□□□□ 0.36
CHMP3-203ENST00000409225 ARID5BQ14865 1188 aa17.29■□□□□ 0.36
CHMP3-203ENST00000409225 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.29■□□□□ 0.36
CHMP3-203ENST00000409225 MMS22LQ6ZRQ5 1243 aa17.29■□□□□ 0.36
CHMP3-203ENST00000409225 TMC6Q7Z403 805 aa17.29■□□□□ 0.36
CHMP3-203ENST00000409225 PRPF39Q86UA1 669 aaKnown RBP17.29■□□□□ 0.36
CHMP3-203ENST00000409225 HJURPQ8NCD3 748 aaPredicted RBP17.29■□□□□ 0.36
CHMP3-203ENST00000409225 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.29■□□□□ 0.36
CHMP3-203ENST00000409225 ABCC13Q9NSE7 274 aa17.29■□□□□ 0.36
CHMP3-203ENST00000409225 CEP83Q9Y592 693 aa17.29■□□□□ 0.36
CHMP3-203ENST00000409225 XPO1O14980 1071 aaKnown RBP17.28■□□□□ 0.36
CHMP3-203ENST00000409225 IRAK2O43187 625 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 LATO43561 262 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 ACSL4O60488 711 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 MAGEC1O60732 1142 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 USP12O75317 370 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 IL1BP01584 269 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 C5AR1P21730 350 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 VAC14Q08AM6 782 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 HS1BP3Q53T59 392 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 PITRM1Q5JRX3 1037 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 LSMEM2Q8N112 164 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 SIX6OS1Q8N1H7 587 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 SLC25A45Q8N413 288 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 KDM1BQ8NB78 822 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 MYEOVQ96EZ4 313 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 PRICKLE1Q96MT3 831 aaPredicted RBP17.28■□□□□ 0.36
CHMP3-203ENST00000409225 DEPDC7Q96QD5 511 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 SLCO3A1Q9UIG8 710 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 TSPAN16Q9UKR8 245 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 CA5BQ9Y2D0 317 aa17.28■□□□□ 0.36
CHMP3-203ENST00000409225 TYW5A2RUC4 315 aaKnown RBP17.27■□□□□ 0.36
CHMP3-203ENST00000409225 FFAR2O15552 330 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 CALUO43852 315 aaPredicted RBP17.27■□□□□ 0.36
CHMP3-203ENST00000409225 OPA1O60313 960 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 SRPRAP08240 638 aaKnown RBP17.27■□□□□ 0.36
CHMP3-203ENST00000409225 KRT13P13646 458 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 MZF1P28698 734 aaPredicted RBP17.27■□□□□ 0.36
CHMP3-203ENST00000409225 METAP1P53582 386 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 RPS24P62847 133 aaKnown RBP17.27■□□□□ 0.36
CHMP3-203ENST00000409225 CDH18Q13634 790 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 STAT4Q14765 748 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 POM121L1PQ3SYA9 428 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 FSCBQ5H9T9 825 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 CDCP2Q5VXM1 449 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 RNF219Q5W0B1 726 aaPredicted RBP17.27■□□□□ 0.36
CHMP3-203ENST00000409225 NUGGCQ68CJ6 796 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 NADSYN1Q6IA69 706 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 INTS8Q75QN2 995 aaKnown RBP17.27■□□□□ 0.36
CHMP3-203ENST00000409225 IQCHQ86VS3 1027 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 CCDC117Q8IWD4 279 aaPredicted RBP17.27■□□□□ 0.36
CHMP3-203ENST00000409225 UNC45BQ8IWX7 931 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 TTC39CQ8N584 583 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 SEMA4DQ92854 862 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 MED8Q96G25 268 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 VCPIP1Q96JH7 1222 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 RPL10LQ96L21 214 aaKnown RBP17.27■□□□□ 0.36
CHMP3-203ENST00000409225 IRX2Q9BZI1 471 aaPredicted RBP17.27■□□□□ 0.36
CHMP3-203ENST00000409225 POLR1BQ9H9Y6 1135 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 TMEM8AQ9HCN3 771 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 ARHGAP20Q9P2F6 1191 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 CYTH4Q9UIA0 394 aa17.27■□□□□ 0.36
CHMP3-203ENST00000409225 ITIH6Q6UXX5 1313 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 SPTA1P02549 2419 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 MAPK13O15264 365 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 RTN2O75298 545 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 CSO75390 466 aaKnown RBP17.26■□□□□ 0.35
CHMP3-203ENST00000409225 DXOO77932 396 aaKnown RBP17.26■□□□□ 0.35
CHMP3-203ENST00000409225 MOCS3O95396 460 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 IGLV3-27P01718 113 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 LCP1P13796 627 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 DRD3P35462 400 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 LSSP48449 732 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 NUMBP49757 651 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 TBX4P57082 545 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 ERVPABLB-1P60509 514 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 ECT2LQ008S8 904 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 BST2Q10589 180 aaKnown RBP17.26■□□□□ 0.35
CHMP3-203ENST00000409225 KIAA1614Q5VZ46 1190 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 MSANTD2Q6P1R3 559 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms