RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 NUGGCQ68CJ6 796 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 SCUBE3Q8IX30 993 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 PARP9Q8IXQ6 854 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 ZNF557Q8N988 423 aaPredicted RBP9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 ENGASEQ8NFI3 743 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 FIBINQ8TAL6 211 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 BAHD1Q8TBE0 780 aaPredicted RBP9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 WFDC5Q8TCV5 224 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 GOLGA1Q92805 767 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 SMARCE1Q969G3 411 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 TTC17Q96AE7 1141 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 BIRC7Q96CA5 298 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 LMLNQ96KR4 655 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 HSFY1Q96LI6 401 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 NT5C1BQ96P26 610 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 CDC6Q99741 560 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 DDX50Q9BQ39 737 aaKnown RBP9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 ZSWIM1Q9BR11 485 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 PRORYQ9H606 182 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 SGK2Q9HBY8 427 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 TM9SF3Q9HD45 589 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 TOR4AQ9NXH8 423 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 STIM2Q9P246 746 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 DKK4Q9UBT3 224 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 NCKAP1Q9Y2A7 1128 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 ANKRD6Q9Y2G4 727 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 SNX11Q9Y5W9 270 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 SLCO1B1Q9Y6L6 691 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 TEX15Q9BXT5 2789 aa9.52□□□□□ -0.89
NIF3L1-203ENST00000409129 GOLGA6L4A6NEF3 574 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 M0QYV0 167 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 FBXO21O94952 628 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 FSBPO95073 299 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 ATXN1LP0C7T5 689 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 BRD2P25440 801 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 CD27P26842 260 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 GRIA4P48058 902 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 ST8SIA6P61647 398 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 CETN1Q12798 172 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 NUMA1Q14980 2115 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 TTC31Q49AM3 519 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 ZNF776Q68DI1 518 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 NADSYN1Q6IA69 706 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 TMPRSS7Q7RTY8 843 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 MFN1Q8IWA4 741 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 PPM1KQ8N3J5 372 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 HJURPQ8NCD3 748 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 LMO3Q8TAP4 145 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 CLEC4CQ8WTT0 213 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 ERCC4Q92889 916 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 KAT5Q92993 513 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 MYO19Q96H55 970 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 DHTKD1Q96HY7 919 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 CEP63Q96MT8 703 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 FCRL3Q96P31 734 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 MIS12Q9H081 205 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 RSPH9Q9H1X1 276 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 KDM4CQ9H3R0 1056 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 MTG2Q9H4K7 406 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 HOOK1Q9UJC3 728 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 SCML1Q9UN30 329 aa9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 TEP1Q99973 2627 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-203ENST00000409129 TYW5A2RUC4 315 aaKnown RBP9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 KCNK3O14649 394 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 PSMA7O14818 248 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 P4HA2O15460 535 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 TLX3O43711 291 aaPredicted RBP9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 RNASEH1O60930 286 aaKnown RBP9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 DKK1O94907 266 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 CALCAP01258 141 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 ASLP04424 464 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 FYNP06241 537 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 KRT10P13645 584 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 CSKP41240 450 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 RPS24P62847 133 aaKnown RBP9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 CFHR1Q03591 330 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 SFSWAPQ12872 951 aaKnown RBP9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 STIM1Q13586 685 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 HNRNPA1L2Q32P51 320 aaKnown RBP9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 CCDC40Q4G0X9 1142 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 KCNT1Q5JUK3 1230 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 DMRTA1Q5VZB9 504 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 KIAA0895LQ68EN5 471 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 ISM2Q6H9L7 571 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 USP30Q70CQ3 517 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 RRAGAQ7L523 313 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 CCDC117Q8IWD4 279 aaPredicted RBP9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 CARNMT1Q8N4J0 409 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 KDM1BQ8NB78 822 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 EHBP1Q8NDI1 1231 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 DQX1Q8TE96 717 aaKnown RBP9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 GANCQ8TET4 914 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 IGSF8Q969P0 613 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 MYEOVQ96EZ4 313 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 SLC39A13Q96H72 371 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 FCRL2Q96LA5 508 aaPredicted RBP9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 MRGPRX3Q96LB0 322 aa9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 PRICKLE1Q96MT3 831 aaPredicted RBP9.5□□□□□ -0.89
NIF3L1-203ENST00000409129 TIGD1Q96MW7 591 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms