RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 PABPC3Q9H361 631 aaKnown RBP13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 WDCPQ9H6R7 721 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 PRSS16Q9NQE7 514 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 EVA1BQ9NVM1 165 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 FBXL12Q9NXK8 326 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 HCN2Q9UL51 889 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 ERVW-1Q9UQF0 538 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 NUP205Q92621 2012 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 KCNJ18B7U540 433 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 MBD3O95983 291 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 IGLV3-25P01717 112 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 PROS1P07225 676 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 ZNF18P17022 549 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 SLC9A1P19634 815 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 CD70P32970 193 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 GRK6P43250 576 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 ARRB1P49407 418 aaPredicted RBP13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 CCT8P50990 548 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 CCR5P51681 352 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 CLCN6P51797 869 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 CDH4P55283 916 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 RPS14P62263 151 aaKnown RBP13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 KCNJ12Q14500 433 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 ZC3H12AQ5D1E8 599 aaKnown RBP13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 RAP1GAP2Q684P5 730 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 ZNF783Q6ZMS7 281 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 PIP4P1Q86T03 277 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 SETD3Q86TU7 594 aaPredicted RBP13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 FAM71AQ8IYT1 594 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 DEFB106AQ8N104 65 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 CCAR2Q8N163 923 aaKnown RBP13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 CYB5D2Q8WUJ1 264 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 IGSF8Q969P0 613 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 PGAP3Q96FM1 320 aaPredicted RBP13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 STK33Q9BYT3 514 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 PLCB1Q9NQ66 1216 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 ANO10Q9NW15 660 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 ADAMTS1Q9UHI8 967 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 EIF2B4Q9UI10 523 aaKnown RBP13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 VPS28Q9UK41 221 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 DMTF1Q9Y222 760 aa13.26□□□□□ -0.29
SNORD88B-201ENST00000408454 M0QYT0 321 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 RIOK3O14730 519 aaKnown RBP13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 RNGTTO60942 597 aaKnown RBP13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 RNASEH2AO75792 299 aaKnown RBP13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 FSBPO95073 299 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 HLA-EP13747 358 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 GOT1P17174 413 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 SLC6A4P31645 630 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 RPS24P62847 133 aaKnown RBP13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 DEUP1Q05D60 604 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 SLC20A2Q08357 652 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 NME3Q13232 169 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 TRIP6Q15654 476 aaKnown RBP13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 PTPRNQ16849 979 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 SLC25A52Q3SY17 297 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 TCP11X2Q5H9J9 407 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 TMEM215Q68D42 235 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 KIAA0895LQ68EN5 471 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 RETSATQ6NUM9 610 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 UNQ6494/PRO21346Q6UXR6 183 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 GLRX5Q86SX6 157 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 PRPF39Q86UA1 669 aaKnown RBP13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 FAM124AQ86V42 546 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 GALNT15Q8N3T1 639 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 DEFB119Q8N690 84 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 FRMD1Q8N878 549 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 ENOX1Q8TC92 643 aaKnown RBP13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 SETD7Q8WTS6 366 aaKnown RBP13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 CLEC4CQ8WTT0 213 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 SORCS1Q8WY21 1168 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 C1orf74Q96LT6 269 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 PRICKLE1Q96MT3 831 aaPredicted RBP13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 MUC3BQ9H195 1237 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 NUCKS1Q9H1E3 243 aaKnown RBP13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 GAREM1Q9H706 876 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 TM7SF3Q9NS93 570 aa13.25□□□□□ -0.29
SNORD88B-201ENST00000408454 MYOFQ9NZM1 2061 aa13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 IL1BP01584 269 aa13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 PRNPP04156 253 aa13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 FYNP06241 537 aa13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 UCHL3P15374 230 aa13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 SLC8A1P32418 973 aa13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 CDH5P33151 784 aaPredicted RBP13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 DRAP1Q14919 205 aaPredicted RBP13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 ACCSLQ4AC99 568 aa13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 FAM102AQ5T9C2 384 aaPredicted RBP13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 SYPL2Q5VXT5 272 aa13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 NEK5Q6P3R8 708 aa13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 CLEC17AQ6ZS10 378 aa13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 IQCHQ86VS3 1027 aa13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 CACUL1Q86Y37 369 aa13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 ADAM32Q8TC27 787 aa13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 PCMTD1Q96MG8 357 aaPredicted RBP13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 CPXM1Q96SM3 734 aa13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 ZSWIM1Q9BR11 485 aa13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 GDF3Q9NR23 364 aa13.24□□□□□ -0.29
SNORD88B-201ENST00000408454 HPCAL4Q9UM19 191 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms