RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 HNRNPA1L2Q32P51 320 aaKnown RBP19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 C2CD6Q53TS8 623 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 DHX40Q8IX18 779 aaKnown RBP19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 ZCCHC9Q8N567 271 aaKnown RBP19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 ZNF397Q8NF99 534 aaPredicted RBP19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 IGSF8Q969P0 613 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 GBP4Q96PP9 640 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 STK33Q9BYT3 514 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 RSPH9Q9H1X1 276 aaPredicted RBP19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 C6orf106Q9H6K1 298 aaPredicted RBP19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 FBRSQ9HAH7 460 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 FANCLQ9NW38 375 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 SUSD2Q9UGT4 822 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 CEACAM1P13688 526 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 MATKP42679 507 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 ECT2LQ008S8 904 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 SEMA3BQ13214 749 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 AUHQ13825 339 aaKnown RBP19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 RPL10LQ96L21 214 aaKnown RBP19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 GANQ9H2C0 597 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 ANLNQ9NQW6 1124 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 PIGVQ9NUD9 493 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 EIF2B4Q9UI10 523 aaKnown RBP19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 VANGL2Q9ULK5 521 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 HS3ST4Q9Y661 456 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 SLCO1B1Q9Y6L6 691 aa19.91■□□□□ 0.78
SMARCB1-204ENST00000407422 MOCS3O95396 460 aa19.9■□□□□ 0.78
SMARCB1-204ENST00000407422 DNTTP04053 509 aa19.9■□□□□ 0.78
SMARCB1-204ENST00000407422 SYPP08247 313 aa19.9■□□□□ 0.78
SMARCB1-204ENST00000407422 MMEP08473 750 aa19.9■□□□□ 0.78
SMARCB1-204ENST00000407422 PDGFRAP16234 1089 aa19.9■□□□□ 0.78
SMARCB1-204ENST00000407422 MZF1P28698 734 aaPredicted RBP19.9■□□□□ 0.78
SMARCB1-204ENST00000407422 GABRB2P47870 512 aa19.9■□□□□ 0.78
SMARCB1-204ENST00000407422 STK19P49842 368 aaPredicted RBP19.9■□□□□ 0.78
SMARCB1-204ENST00000407422 ZBTB16Q05516 673 aa19.9■□□□□ 0.78
SMARCB1-204ENST00000407422 ZNF252P-AS1Q0IIN9 211 aa19.9■□□□□ 0.78
SMARCB1-204ENST00000407422 C9orf64Q5T6V5 341 aa19.9■□□□□ 0.78
SMARCB1-204ENST00000407422 ZNF776Q68DI1 518 aaPredicted RBP19.9■□□□□ 0.78
SMARCB1-204ENST00000407422 C14orf80Q86SX3 495 aa19.9■□□□□ 0.78
SMARCB1-204ENST00000407422 ZDHHC17Q8IUH5 632 aa19.9■□□□□ 0.78
SMARCB1-204ENST00000407422 HDDC3Q8N4P3 179 aa19.9■□□□□ 0.78
SMARCB1-204ENST00000407422 C18orf8Q96DM3 657 aa19.9■□□□□ 0.78
SMARCB1-204ENST00000407422 NPY6RQ99463 290 aa19.9■□□□□ 0.78
SMARCB1-204ENST00000407422 ANGPTL2Q9UKU9 493 aa19.9■□□□□ 0.78
SMARCB1-204ENST00000407422 CACNA1BQ00975 2339 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 A0A1B0GTW7 788 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 A0A1B0GVM2 712 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 TCAF2A6NFQ2 919 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 I6L893 689 aaPredicted RBP19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 EPHB6O15197 1021 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 OPHN1O60890 802 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 PAGE1O75459 146 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 SRPRAP08240 638 aaKnown RBP19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 GRIK2Q13002 908 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 ARID5BQ14865 1188 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 RABGAP1LQ5R372 815 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 CXorf57Q6NSI4 855 aaKnown RBP19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 PIP4P1Q86T03 277 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 ERICH1Q86X53 443 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 XYLT1Q86Y38 959 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 KDM1BQ8NB78 822 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 OR52K2Q8NGK3 314 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 C1orf216Q8TAB5 229 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 EPS8L1Q8TE68 723 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 CPA5Q8WXQ8 436 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 RPRD1AQ96P16 312 aaPredicted RBP19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 SIK2Q9H0K1 926 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 FAM207AQ9NSI2 230 aaPredicted RBP19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 AKAP13Q12802 2813 aa19.89■□□□□ 0.77
SMARCB1-204ENST00000407422 BCAT2O15382 392 aaPredicted RBP19.88■□□□□ 0.77
SMARCB1-204ENST00000407422 ADCY5O95622 1261 aa19.88■□□□□ 0.77
SMARCB1-204ENST00000407422 SEMA4FO95754 770 aa19.88■□□□□ 0.77
SMARCB1-204ENST00000407422 FAM102AQ5T9C2 384 aaPredicted RBP19.88■□□□□ 0.77
SMARCB1-204ENST00000407422 TTC39BQ5VTQ0 682 aaPredicted RBP19.88■□□□□ 0.77
SMARCB1-204ENST00000407422 SLC20A1Q8WUM9 679 aa19.88■□□□□ 0.77
SMARCB1-204ENST00000407422 SNX19Q92543 992 aa19.88■□□□□ 0.77
SMARCB1-204ENST00000407422 NT5C3BQ969T7 300 aa19.88■□□□□ 0.77
SMARCB1-204ENST00000407422 BTBD1Q9H0C5 482 aa19.88■□□□□ 0.77
SMARCB1-204ENST00000407422 PABPC3Q9H361 631 aaKnown RBP19.88■□□□□ 0.77
SMARCB1-204ENST00000407422 DNAAF2Q9NVR5 837 aaKnown RBP19.88■□□□□ 0.77
SMARCB1-204ENST00000407422 SERGEFQ9UGK8 458 aa19.88■□□□□ 0.77
SMARCB1-204ENST00000407422 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.88■□□□□ 0.77
SMARCB1-204ENST00000407422 ITIH6Q6UXX5 1313 aa19.88■□□□□ 0.77
SMARCB1-204ENST00000407422 GFPT2O94808 682 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 CD59P13987 128 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 CXCR3P49682 368 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 SULT1E1P49888 294 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 POLR2FP61218 127 aaKnown RBP19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 TTC31Q49AM3 519 aaPredicted RBP19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 RNF219Q5W0B1 726 aaPredicted RBP19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 TRNP1Q6NT89 227 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 MMAAQ8IVH4 418 aaKnown RBP19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 PTPRN2Q92932 1015 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 FAM129BQ96TA1 746 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 TBCBQ99426 244 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 TKTL2Q9H0I9 626 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 PCED1AQ9H1Q7 454 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 NLRC4Q9NPP4 1024 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 TMPRSS4Q9NRS4 437 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms