RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CYP3A4P08684 503 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 NDUFB7P17568 137 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 ENGP17813 658 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 YY1P25490 414 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 PNPLA4P41247 253 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 STAT1P42224 750 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 FOXL2P58012 376 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 FAM153CQ494X1 144 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 LRRC24Q50LG9 513 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 SNX30Q5VWJ9 437 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 CEP85Q6P2H3 762 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 ZNF782Q6ZMW2 699 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 B4GALNT4Q76KP1 1039 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 PARS2Q7L3T8 475 aaKnown RBP5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 CAND1Q86VP6 1230 aaKnown RBP5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 RAB11FIP4Q86YS3 637 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 NGEFQ8N5V2 710 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 SEMA6DQ8NFY4 1073 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 FAR2Q96K12 515 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 PPP1R10Q96QC0 940 aaKnown RBP5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 PRR25Q96S07 402 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 NUDT16L1Q9BRJ7 211 aaKnown RBP5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 CENPOQ9BU64 300 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 TAOK3Q9H2K8 898 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 GHITMQ9H3K2 345 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 ADARB2Q9NS39 739 aaKnown RBP5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 ANKEF1Q9NU02 776 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 GDAQ9Y2T3 454 aa5.42□□□□□ -1.54
HMGB1P13-201ENST00000406019 SPRY2O43597 315 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 DHX16O60231 1041 aaKnown RBP5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 PTP4A3O75365 173 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 SGPL1O95470 568 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 SCGB1D1O95968 90 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 PRKCGP05129 697 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 ACP5P13686 325 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 HOXD13P35453 343 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 TBL3Q12788 808 aaKnown RBP5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 PTP4A2Q12974 167 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 CAMK1Q14012 370 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 CCNG2Q16589 344 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 C16orf89Q6UX73 402 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 ZNF66Q6ZN08 573 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 DPY19L3Q6ZPD9 716 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 KRT27Q7Z3Y8 459 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 ANKRD44Q8N8A2 993 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 LSMEM1Q8N8F7 131 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 RBM17Q96I25 401 aaKnown RBP5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 EIF3CQ99613 913 aaKnown RBP5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 SDF4Q9BRK5 362 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 USP44Q9H0E7 712 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 STN1Q9H668 368 aaKnown RBP5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 TBC1D14Q9P2M4 693 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 SLC25A10Q9UBX3 287 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 CNOT7Q9UIV1 285 aaKnown RBP5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 TRPC5Q9UL62 973 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 PCDHA10Q9Y5I2 948 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 TNFRSF18Q9Y5U5 241 aa5.41□□□□□ -1.54
HMGB1P13-201ENST00000406019 CCDC187A0A096LP49 1063 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 AGAP5A6NIR3 686 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 FAM90A7PA6NKC0 464 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 FAM90A22PA8MWA6 464 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 FAM90A12PA8MX19 464 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 FAM90A23PA8MXZ1 464 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 PEX12O00623 359 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 AHCYL1O43865 530 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 GUCY1B2O75343 617 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 TULP3O75386 442 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 JTBO76095 146 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 MLYCDO95822 493 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 CLEC3BP05452 202 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 MYCLP12524 364 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 ALADP13716 330 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 MMP8P22894 467 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 RRM1P23921 792 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 EPHA8P29322 1005 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 MAPK4P31152 587 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 MCM5P33992 734 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 HOXD12P35452 270 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 TPTEP56180 551 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 RPP30P78346 268 aaKnown RBP5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 PSG6Q00889 435 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 SETQ01105 290 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 POU5F1Q01860 360 aaKnown RBP5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 TLE3Q04726 772 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 DNASE1L3Q13609 305 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 THOC5Q13769 683 aaKnown RBP5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 SEC23BQ15437 767 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 FAM187BQ17R55 369 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 RNASE12Q5GAN4 147 aaKnown RBP5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 ANKRD40Q6AI12 368 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 ACSM6Q6P461 480 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 SYNE3Q6ZMZ3 975 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 ZNF804AQ7Z570 1209 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 NFKBIDQ8NI38 313 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 ZCCHC10Q8TBK6 192 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 TRMT61AQ96FX7 289 aaKnown RBP5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 MASTLQ96GX5 879 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 CCDC68Q9H2F9 335 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 KRT84Q9NSB2 600 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 ZDHHC7Q9NXF8 308 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms