RNA–Protein interactions for RNA: ENST00000405805.5

HMGB1-206, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGB1, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-206ENST00000405805 PAN2Q504Q3 1202 aaKnown RBP12.21□□□□□ -0.45
HMGB1-206ENST00000405805 PDZD4Q76G19 769 aaPredicted RBP12.21□□□□□ -0.45
HMGB1-206ENST00000405805 SLCO2A1Q92959 643 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 PIWIL1Q96J94 861 aaKnown RBP12.21□□□□□ -0.45
HMGB1-206ENST00000405805 TUBGCP5Q96RT8 1024 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 KCNK16Q96T55 309 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 EBF3Q9H4W6 596 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 PLLPQ9Y342 182 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 LYPLA2O95372 231 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 TSPAN8P19075 237 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 CDH3P22223 829 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 PEX2P28328 305 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 NAGLUP54802 743 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 TJAP1Q5JTD0 557 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 CDCA2Q69YH5 1023 aaPredicted RBP12.21□□□□□ -0.45
HMGB1-206ENST00000405805 ABHD15Q6UXT9 468 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 PYROXD2Q8N2H3 581 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 SLC35B2Q8TB61 432 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 SLC16A10Q8TF71 515 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 DCAKDQ8WVC6 231 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 HPS1Q92902 700 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 CEP295NLQ96MC4 621 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 HBS1LQ9Y450 684 aaKnown RBP12.21□□□□□ -0.45
HMGB1-206ENST00000405805 SNX13Q9Y5W8 968 aa12.21□□□□□ -0.45
HMGB1-206ENST00000405805 ARAP2Q8WZ64 1704 aa12.21□□□□□ -0.46
HMGB1-206ENST00000405805 PAPSS1O43252 624 aaPredicted RBP12.21□□□□□ -0.46
HMGB1-206ENST00000405805 ARHGEF9O43307 516 aa12.21□□□□□ -0.46
HMGB1-206ENST00000405805 ITM2AO43736 263 aa12.21□□□□□ -0.46
HMGB1-206ENST00000405805 ZNF286BP0CG31 522 aa12.21□□□□□ -0.46
HMGB1-206ENST00000405805 GOT1P17174 413 aa12.21□□□□□ -0.46
HMGB1-206ENST00000405805 PSMB4P28070 264 aa12.21□□□□□ -0.46
HMGB1-206ENST00000405805 RTP1P59025 263 aa12.21□□□□□ -0.46
HMGB1-206ENST00000405805 DLG2Q15700 870 aa12.21□□□□□ -0.46
HMGB1-206ENST00000405805 LRRC38Q5VT99 294 aa12.21□□□□□ -0.46
HMGB1-206ENST00000405805 FAAH2Q6GMR7 532 aa12.21□□□□□ -0.46
HMGB1-206ENST00000405805 TMEM214Q6NUQ4 689 aaKnown RBP12.21□□□□□ -0.46
HMGB1-206ENST00000405805 NUP93Q8N1F7 819 aa12.21□□□□□ -0.46
HMGB1-206ENST00000405805 OR52K1Q8NGK4 314 aa12.21□□□□□ -0.46
HMGB1-206ENST00000405805 CITED4Q96RK1 184 aa12.21□□□□□ -0.46
HMGB1-206ENST00000405805 PIF1Q9H611 641 aa12.21□□□□□ -0.46
HMGB1-206ENST00000405805 STX18Q9P2W9 335 aaKnown RBP12.21□□□□□ -0.46
HMGB1-206ENST00000405805 SSX2IPQ9Y2D8 614 aa12.21□□□□□ -0.46
HMGB1-206ENST00000405805 PCDHGA3Q9Y5H0 932 aa12.21□□□□□ -0.46
HMGB1-206ENST00000405805 ANKRD12Q6UB98 2062 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 SCN7AQ01118 1682 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 HUS1O60921 280 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 OAS1P00973 400 aaKnown RBP12.2□□□□□ -0.46
HMGB1-206ENST00000405805 JCHAINP01591 159 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 VDRP11473 427 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 ITPRIPL1Q6GPH6 555 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 PLD5Q8N7P1 536 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 NAT8LQ8N9F0 302 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 ELOVL4Q9GZR5 314 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 ING2Q9H160 280 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 SYNPO2Q9UMS6 1093 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 A0A096LPK6 155 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 RNF103O00237 685 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 AKAP10O43572 662 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 GLRA3O75311 464 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 METTL18O95568 372 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 PMLP29590 882 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 SPRP35270 261 aaPredicted RBP12.2□□□□□ -0.46
HMGB1-206ENST00000405805 TPI1P60174 286 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 LBRQ14739 615 aaKnown RBP12.2□□□□□ -0.46
HMGB1-206ENST00000405805 DPY19L2Q6NUT2 758 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 TLK2Q86UE8 772 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 OR6Y1Q8NGX8 325 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 DENND1AQ8TEH3 1009 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 XPNPEP3Q9NQH7 507 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 CAB39Q9Y376 341 aaPredicted RBP12.2□□□□□ -0.46
HMGB1-206ENST00000405805 MAP3K13O43283 966 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 SORBS2O94875 1100 aaKnown RBP12.2□□□□□ -0.46
HMGB1-206ENST00000405805 INSRRP14616 1297 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 TAF12Q16514 161 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 RSBN1Q5VWQ0 802 aaPredicted RBP12.2□□□□□ -0.46
HMGB1-206ENST00000405805 TWF2Q6IBS0 349 aaKnown RBP12.2□□□□□ -0.46
HMGB1-206ENST00000405805 XYLT1Q86Y38 959 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 TDRD5Q8NAT2 981 aaKnown RBP12.2□□□□□ -0.46
HMGB1-206ENST00000405805 EDEM1Q92611 657 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 CDT1Q9H211 546 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 TCF7L2Q9NQB0 619 aa12.2□□□□□ -0.46
HMGB1-206ENST00000405805 RUVBL2Q9Y230 463 aaKnown RBP12.2□□□□□ -0.46
HMGB1-206ENST00000405805 NFKBIEO00221 500 aa12.19□□□□□ -0.46
HMGB1-206ENST00000405805 EEF2KO00418 725 aaKnown RBP12.19□□□□□ -0.46
HMGB1-206ENST00000405805 MAGEB3O15480 346 aa12.19□□□□□ -0.46
HMGB1-206ENST00000405805 TCEA3O75764 348 aa12.19□□□□□ -0.46
HMGB1-206ENST00000405805 CCDC166P0CW27 439 aa12.19□□□□□ -0.46
HMGB1-206ENST00000405805 DDX5P17844 614 aaKnown RBP12.19□□□□□ -0.46
HMGB1-206ENST00000405805 ZNF252P-AS1Q0IIN9 211 aa12.19□□□□□ -0.46
HMGB1-206ENST00000405805 POU6F1Q14863 301 aa12.19□□□□□ -0.46
HMGB1-206ENST00000405805 TREML2Q5T2D2 321 aa12.19□□□□□ -0.46
HMGB1-206ENST00000405805 KIAA0319LQ8IZA0 1049 aa12.19□□□□□ -0.46
HMGB1-206ENST00000405805 ZNF786Q8N393 782 aa12.19□□□□□ -0.46
HMGB1-206ENST00000405805 HDAC2Q92769 488 aaKnown RBP12.19□□□□□ -0.46
HMGB1-206ENST00000405805 PHF21BQ96EK2 531 aa12.19□□□□□ -0.46
HMGB1-206ENST00000405805 ACO2Q99798 780 aaKnown RBP12.19□□□□□ -0.46
HMGB1-206ENST00000405805 FSD1LQ9BXM9 530 aa12.19□□□□□ -0.46
HMGB1-206ENST00000405805 ILKAPQ9H0C8 392 aaPredicted RBP12.19□□□□□ -0.46
HMGB1-206ENST00000405805 ST6GALNAC4Q9H4F1 302 aa12.19□□□□□ -0.46
HMGB1-206ENST00000405805 SNTG2Q9NY99 539 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms