RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 PRMT1Q99873 361 aaKnown RBP26.31■■□□□ 1.8
CPNE1-205ENST00000401607 FRMD8Q9BZ67 464 aaPredicted RBP26.31■■□□□ 1.8
CPNE1-205ENST00000401607 TRPM5Q9NZQ8 1165 aa26.31■■□□□ 1.8
CPNE1-205ENST00000401607 PPARGC1AQ9UBK2 798 aaKnown RBP26.31■■□□□ 1.8
CPNE1-205ENST00000401607 SLC4A7Q9Y6M7 1214 aa26.31■■□□□ 1.8
CPNE1-205ENST00000401607 IGLV3-10A0A075B6K4 115 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 COCHO43405 550 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 TCEA3O75764 348 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 KCNQ1P51787 676 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 GPX6P59796 221 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 C6orf118Q5T5N4 469 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 RAP1GAP2Q684P5 730 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 KLHDC10Q6PID8 442 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 TADA2BQ86TJ2 420 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 AGGF1Q8N302 714 aaeCLIP26.3■■□□□ 1.8
CPNE1-205ENST00000401607 FBXO36Q8NEA4 188 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 TLCD1Q96CP7 247 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 SLC39A8Q9C0K1 460 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 IGSF9Q9P2J2 1179 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 NOVA2Q9UNW9 492 aaKnown RBP26.3■■□□□ 1.8
CPNE1-205ENST00000401607 SSX2IPQ9Y2D8 614 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 A0A087WUV0 522 aaPredicted RBP26.3■■□□□ 1.8
CPNE1-205ENST00000401607 F5H423 210 aaPredicted RBP26.3■■□□□ 1.8
CPNE1-205ENST00000401607 AVILO75366 819 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 CA8P35219 290 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 ZNF33AQ06730 810 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 ZBTB17Q13105 803 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 ARHGAP36Q6ZRI8 547 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 DNAJB7Q7Z6W7 309 aaPredicted RBP26.3■■□□□ 1.8
CPNE1-205ENST00000401607 ZSCAN18Q8TBC5 510 aaPredicted RBP26.3■■□□□ 1.8
CPNE1-205ENST00000401607 PYROXD1Q8WU10 500 aa26.3■■□□□ 1.8
CPNE1-205ENST00000401607 NUP205Q92621 2012 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 DFFAO00273 331 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 MTSS1O43312 755 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 SPATA31D3P0C874 917 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 PSMB4P28070 264 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 COG7P83436 770 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 STAT4Q14765 748 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 TERF2Q15554 542 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 TAF12Q16514 161 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 PARP6Q2NL67 630 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 NUGGCQ68CJ6 796 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 NADSYN1Q6IA69 706 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 FBXL22Q6P050 247 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 SPATA31D4Q6ZUB0 917 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 PID1Q7Z2X4 250 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 IGDCC3Q8IVU1 814 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 PHOSPHO2Q8TCD6 241 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 IGSF8Q969P0 613 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 PSMG2Q969U7 264 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 TSGA13Q96PP4 275 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 ZYG11BQ9C0D3 744 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 KLHL8Q9P2G9 620 aaPredicted RBP26.29■■□□□ 1.8
CPNE1-205ENST00000401607 TEX264Q9Y6I9 313 aa26.29■■□□□ 1.8
CPNE1-205ENST00000401607 E7EVH7 732 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 TGM5O43548 720 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 TLL1O43897 1013 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 ATP2A2P16615 1042 aaKnown RBP26.28■■□□□ 1.8
CPNE1-205ENST00000401607 RHOQP17081 205 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 ELK3P41970 407 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 MAGEA3P43357 314 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 EPHB3P54753 998 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 ALFQ53S48 1182 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 TNFAIP8L3Q5GJ75 292 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 LRRC31Q6UY01 552 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 CAPN12Q6ZSI9 719 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 VPS37BQ9H9H4 285 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 CHMP2BQ9UQN3 213 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 CNTN5O94779 1100 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 CXCL14O95715 111 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 NR1D1P20393 614 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 SKIDA1Q1XH10 827 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 CCDC38Q502W7 563 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 DNAJC21Q5F1R6 531 aaKnown RBP26.28■■□□□ 1.8
CPNE1-205ENST00000401607 TMEM150AQ86TG1 271 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 ATP11CQ8NB49 1132 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 GORASP1Q9BQQ3 440 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 NACA2Q9H009 215 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 NOL6Q9H6R4 1146 aaKnown RBP26.28■■□□□ 1.8
CPNE1-205ENST00000401607 ZNF334Q9HCZ1 680 aaPredicted RBP26.28■■□□□ 1.8
CPNE1-205ENST00000401607 EIF2B3Q9NR50 452 aaKnown RBP26.28■■□□□ 1.8
CPNE1-205ENST00000401607 TMEM248Q9NWD8 314 aa26.28■■□□□ 1.8
CPNE1-205ENST00000401607 DOCK4Q8N1I0 1966 aa26.27■■□□□ 1.8
CPNE1-205ENST00000401607 NYNRINQ9P2P1 1898 aaKnown RBP26.27■■□□□ 1.8
CPNE1-205ENST00000401607 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.27■■□□□ 1.8
CPNE1-205ENST00000401607 GOLGA6L7A0A1B0GV03 622 aa26.27■■□□□ 1.8
CPNE1-205ENST00000401607 DRGXA6NNA5 263 aa26.27■■□□□ 1.8
CPNE1-205ENST00000401607 RGS16O15492 202 aaPredicted RBP26.27■■□□□ 1.8
CPNE1-205ENST00000401607 OAS1P00973 400 aaKnown RBP26.27■■□□□ 1.8
CPNE1-205ENST00000401607 CCNCP24863 283 aa26.27■■□□□ 1.8
CPNE1-205ENST00000401607 SSTR1P30872 391 aa26.27■■□□□ 1.8
CPNE1-205ENST00000401607 GRIA1P42261 906 aa26.27■■□□□ 1.8
CPNE1-205ENST00000401607 MAGOHP61326 146 aaKnown RBP26.27■■□□□ 1.8
CPNE1-205ENST00000401607 MTA1Q13330 715 aa26.27■■□□□ 1.8
CPNE1-205ENST00000401607 TEX44Q53QW1 395 aa26.27■■□□□ 1.8
CPNE1-205ENST00000401607 ACBD5Q5T8D3 534 aaPredicted RBP26.27■■□□□ 1.8
CPNE1-205ENST00000401607 TMC7Q7Z402 723 aa26.27■■□□□ 1.8
CPNE1-205ENST00000401607 ATPAF2Q8N5M1 289 aa26.27■■□□□ 1.8
CPNE1-205ENST00000401607 MYEOVQ96EZ4 313 aa26.27■■□□□ 1.8
CPNE1-205ENST00000401607 SHROOM3Q8TF72 1996 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms