RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 DCAF6Q58WW2 860 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 MS4A13Q5J8X5 152 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 TAC4Q86UU9 113 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 SCUBE3Q8IX30 993 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 APCDD1Q8J025 514 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 ENGASEQ8NFI3 743 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 SAP25Q8TEE9 199 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 CNDP2Q96KP4 475 aaKnown RBP12.35□□□□□ -0.43
LINC00544-201ENST00000400540 RPL10LQ96L21 214 aaKnown RBP12.35□□□□□ -0.43
LINC00544-201ENST00000400540 OMDQ99983 421 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 AASDHPPTQ9NRN7 309 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 SLCO3A1Q9UIG8 710 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 SCML1Q9UN30 329 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 NAALADL1Q9UQQ1 740 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 CFAP46Q8IYW2 2715 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 HELZ2Q9BYK8 2649 aaKnown RBP12.35□□□□□ -0.43
LINC00544-201ENST00000400540 ITIH6Q6UXX5 1313 aa12.35□□□□□ -0.43
LINC00544-201ENST00000400540 LRRC72A6NJI9 287 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 TLX3O43711 291 aaPredicted RBP12.34□□□□□ -0.43
LINC00544-201ENST00000400540 RNASEH1O60930 286 aaKnown RBP12.34□□□□□ -0.43
LINC00544-201ENST00000400540 LUC7L3O95232 432 aaKnown RBP12.34□□□□□ -0.43
LINC00544-201ENST00000400540 ASLP04424 464 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 PAEPP09466 180 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 ABCB4P21439 1286 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 ITPKBP27987 946 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 CD38P28907 300 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 SLC8A1P32418 973 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 FMO5P49326 533 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 ADPRHP54922 357 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 FKBP3Q00688 224 aaKnown RBP12.34□□□□□ -0.43
LINC00544-201ENST00000400540 CNGA2Q16280 664 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 ZNF658Q5TYW1 1059 aaPredicted RBP12.34□□□□□ -0.43
LINC00544-201ENST00000400540 RAP1GAP2Q684P5 730 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 ARHGEF19Q8IW93 802 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 STK40Q8N2I9 435 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 PPM1KQ8N3J5 372 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 EID2Q8N6I1 236 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 OR2T34Q8NGX1 318 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 AZIN2Q96A70 460 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 SLC39A13Q96H72 371 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 FAM129BQ96TA1 746 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 TSG101Q99816 390 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 IRX2Q9BZI1 471 aaPredicted RBP12.34□□□□□ -0.43
LINC00544-201ENST00000400540 ARMCX3Q9UH62 379 aaPredicted RBP12.34□□□□□ -0.43
LINC00544-201ENST00000400540 ADAMTS1Q9UHI8 967 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 KIAA1257Q9ULG3 409 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 FZD4Q9ULV1 537 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 TLR6Q9Y2C9 796 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 CEP83Q9Y592 693 aa12.34□□□□□ -0.43
LINC00544-201ENST00000400540 EDDM13A0A1B0GTR0 161 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 TYW5A2RUC4 315 aaKnown RBP12.33□□□□□ -0.44
LINC00544-201ENST00000400540 DFNA5O60443 496 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 RFPL3O75679 317 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 ZIC2O95409 532 aaPredicted RBP12.33□□□□□ -0.44
LINC00544-201ENST00000400540 LDOC1O95751 146 aaPredicted RBP12.33□□□□□ -0.44
LINC00544-201ENST00000400540 PRB1P04280 392 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 ITGAVP06756 1048 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 SRPRAP08240 638 aaKnown RBP12.33□□□□□ -0.44
LINC00544-201ENST00000400540 EPHA8P29322 1005 aaPredicted RBP12.33□□□□□ -0.44
LINC00544-201ENST00000400540 DRD3P35462 400 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 ABCG1P45844 678 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 ACADVLP49748 655 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 ECT2LQ008S8 904 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 BNIP3Q12983 259 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 ARID5BQ14865 1188 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 COBLL1Q53SF7 1204 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 SYPL2Q5VXT5 272 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 RRAGAQ7L523 313 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 TMPRSS12Q86WS5 348 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 CIR1Q86X95 450 aaPredicted RBP12.33□□□□□ -0.44
LINC00544-201ENST00000400540 LGI2Q8N0V4 545 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 ZNF557Q8N988 423 aaPredicted RBP12.33□□□□□ -0.44
LINC00544-201ENST00000400540 OR14C36Q8NHC7 312 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 LMO3Q8TAP4 145 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 PTPRN2Q92932 1015 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 FAM149B1Q96BN6 582 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 NXPE2Q96DL1 559 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 SERAC1Q96JX3 654 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 HSFY1Q96LI6 401 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 SERPINB11Q96P15 392 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 NT5C1BQ96P26 610 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 SCAND2PQ9GZW5 306 aaPredicted RBP12.33□□□□□ -0.44
LINC00544-201ENST00000400540 RMND1Q9NWS8 449 aa12.33□□□□□ -0.44
LINC00544-201ENST00000400540 COL27A1Q8IZC6 1860 aaPredicted RBP12.33□□□□□ -0.44
LINC00544-201ENST00000400540 TARSL2A2RTX5 802 aaKnown RBP12.32□□□□□ -0.44
LINC00544-201ENST00000400540 FBXO21O94952 628 aa12.32□□□□□ -0.44
LINC00544-201ENST00000400540 IL1BP01584 269 aa12.32□□□□□ -0.44
LINC00544-201ENST00000400540 TACR2P21452 398 aa12.32□□□□□ -0.44
LINC00544-201ENST00000400540 MZF1P28698 734 aaPredicted RBP12.32□□□□□ -0.44
LINC00544-201ENST00000400540 CCR5P51681 352 aa12.32□□□□□ -0.44
LINC00544-201ENST00000400540 NXPH1P58417 271 aa12.32□□□□□ -0.44
LINC00544-201ENST00000400540 PITX1P78337 314 aaPredicted RBP12.32□□□□□ -0.44
LINC00544-201ENST00000400540 SEMG2Q02383 582 aa12.32□□□□□ -0.44
LINC00544-201ENST00000400540 TARDBPQ13148 414 aaKnown RBP eCLIP12.32□□□□□ -0.44
LINC00544-201ENST00000400540 ZC3H12AQ5D1E8 599 aaKnown RBP12.32□□□□□ -0.44
LINC00544-201ENST00000400540 HES3Q5TGS1 186 aa12.32□□□□□ -0.44
LINC00544-201ENST00000400540 DENND1BQ6P3S1 775 aa12.32□□□□□ -0.44
LINC00544-201ENST00000400540 SND1Q7KZF4 910 aaKnown RBP eCLIP12.32□□□□□ -0.44
LINC00544-201ENST00000400540 CHSY1Q86X52 802 aa12.32□□□□□ -0.44
LINC00544-201ENST00000400540 SPATS2Q86XZ4 545 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms