RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 PYROXD2Q8N2H3 581 aa18.95■□□□□ 0.62
USP48-204ENST00000400301 EFHBQ8N7U6 833 aa18.95■□□□□ 0.62
USP48-204ENST00000400301 FAM136AQ96C01 138 aa18.95■□□□□ 0.62
USP48-204ENST00000400301 DUSP16Q9BY84 665 aa18.95■□□□□ 0.62
USP48-204ENST00000400301 DMAP1Q9NPF5 467 aaPredicted RBP18.95■□□□□ 0.62
USP48-204ENST00000400301 ARHGEF3Q9NR81 526 aa18.95■□□□□ 0.62
USP48-204ENST00000400301 A0A0G2JLL6 359 aaPredicted RBP18.94■□□□□ 0.62
USP48-204ENST00000400301 COL1A2P08123 1366 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 SLC2A3P11169 496 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 PPARGP37231 505 aaPredicted RBP18.94■□□□□ 0.62
USP48-204ENST00000400301 SCNN1GP51170 649 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 PRKAA1Q13131 559 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 PRRT2Q7Z6L0 340 aaPredicted RBP18.94■□□□□ 0.62
USP48-204ENST00000400301 HAPLN2Q9GZV7 340 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 PDLIM7Q9NR12 457 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 MFSD11O43934 449 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 MT-CO1P00395 513 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 TPSB2P20231 275 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 HADHAP40939 763 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 CD151P48509 253 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 TPSAB1Q15661 275 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 ZNF470Q6ECI4 717 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 TRMT10BQ6PF06 316 aaKnown RBP18.94■□□□□ 0.62
USP48-204ENST00000400301 TFAP2DQ7Z6R9 452 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 CATSPER2Q96P56 530 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 MMADHCQ9H3L0 296 aaPredicted RBP18.94■□□□□ 0.62
USP48-204ENST00000400301 IL1RL2Q9HB29 575 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 GPAMQ9HCL2 828 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 IL1RAPL1Q9NZN1 696 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 ERI2A8K979 691 aaKnown RBP18.94■□□□□ 0.62
USP48-204ENST00000400301 BIRC5O15392 142 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 GSC2O15499 205 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 NAGLUP54802 743 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 STX5Q13190 355 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 CCDC185Q8N715 623 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 PBXIP1Q96AQ6 731 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 LPIN3Q9BQK8 851 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 DRC3Q9H069 523 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 EPB41L4BQ9H329 900 aa18.94■□□□□ 0.62
USP48-204ENST00000400301 CLGNO14967 610 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 ATP5BP06576 529 aaKnown RBP18.93■□□□□ 0.62
USP48-204ENST00000400301 TUBP50607 506 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 EFEMP1Q12805 493 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 FSCN1Q16658 493 aaKnown RBP18.93■□□□□ 0.62
USP48-204ENST00000400301 JADE3Q92613 823 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 FAXDC2Q96IV6 333 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 IL22Q9GZX6 179 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 FETUBQ9UGM5 382 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 KIAA1551Q9HCM1 1747 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 SLCO1B7G3V0H7 640 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 LGR5O75473 907 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 MMP3P08254 477 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 PTPN9P43378 593 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 ZNF132P52740 706 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 IL1RL1Q01638 556 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 KYQ8NBH2 561 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 PCYOX1LQ8NBM8 494 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 NLGN2Q8NFZ4 835 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 XYLT2Q9H1B5 865 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 ADAM7Q9H2U9 754 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 TXNRD2Q9NNW7 524 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 PDP2Q9P2J9 529 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 MCM8Q9UJA3 840 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 PRR5-ARHGAP8B1AHC4 643 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 DAB1O75553 588 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 PIGNO95427 931 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 GABRB2P47870 512 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 ARHGAP8P85298 464 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 PTAR1Q7Z6K3 402 aaPredicted RBP18.93■□□□□ 0.62
USP48-204ENST00000400301 TMEM86AQ8N2M4 240 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 RNF148Q8N7C7 305 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 ZNF512Q96ME7 567 aaPredicted RBP18.93■□□□□ 0.62
USP48-204ENST00000400301 NR2E3Q9Y5X4 410 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 CSPG5O95196 566 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 TFE3P19532 575 aaPredicted RBP18.93■□□□□ 0.62
USP48-204ENST00000400301 MAP3K10Q02779 954 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 ATP6V0D2Q8N8Y2 350 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 CLEC4CQ8WTT0 213 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 ZBTB18Q99592 522 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 BCO2Q9BYV7 579 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 DENND2DQ9H6A0 471 aaPredicted RBP18.93■□□□□ 0.62
USP48-204ENST00000400301 ZNF212Q9UDV6 495 aa18.93■□□□□ 0.62
USP48-204ENST00000400301 ABCA3Q99758 1704 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 WASHC5Q12768 1159 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 TMC7Q7Z402 723 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 SNX32Q86XE0 403 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 C10orf107Q8IVU9 208 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 C10orf82Q8WW14 230 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 PYDC1Q8WXC3 89 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 USP13Q92995 863 aaPredicted RBP18.92■□□□□ 0.62
USP48-204ENST00000400301 MAN1C1Q9NR34 630 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 MRGBPQ9NV56 204 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 DSEQ9UL01 958 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 RPL26L1Q9UNX3 145 aaKnown RBP18.92■□□□□ 0.62
USP48-204ENST00000400301 SORCS3Q9UPU3 1222 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 SRP72O76094 671 aaKnown RBP18.92■□□□□ 0.62
USP48-204ENST00000400301 PAX7P23759 505 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 CRHR1P34998 444 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 ADRA1BP35368 520 aa18.92■□□□□ 0.62
USP48-204ENST00000400301 SOX11P35716 441 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms