RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 C21orf59P57076 290 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 IL23RQ5VWK5 629 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 CMC1Q7Z7K0 106 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 PCDH20Q8N6Y1 951 aaKnown RBP17.47■□□□□ 0.39
PTPRA-205ENST00000399903 DDHD1Q8NEL9 900 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 POPDC2Q9HBU9 364 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 MAP3K20Q9NYL2 800 aaKnown RBP17.47■□□□□ 0.39
PTPRA-205ENST00000399903 STK39Q9UEW8 545 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 AGO2Q9UKV8 859 aaKnown RBP17.47■□□□□ 0.39
PTPRA-205ENST00000399903 MYRFQ9Y2G1 1151 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 RGPD3A6NKT7 1758 aaPredicted RBP17.47■□□□□ 0.39
PTPRA-205ENST00000399903 RGPD4Q7Z3J3 1758 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 HMX2A2RU54 273 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 PSMD12O00232 456 aaPredicted RBP17.47■□□□□ 0.39
PTPRA-205ENST00000399903 ZC3H11AO75152 810 aaKnown RBP eCLIP17.47■□□□□ 0.391e-7■■□□□ 11.9
PTPRA-205ENST00000399903 PIM1P11309 404 aaPredicted RBP17.47■□□□□ 0.39
PTPRA-205ENST00000399903 ZNF24P17028 368 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 MIPP30301 263 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 TNFSF9P41273 254 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 SEPT6Q14141 434 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 HSDL1Q3SXM5 330 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 ZACNQ401N2 412 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 FBXO16Q8IX29 292 aaPredicted RBP17.47■□□□□ 0.39
PTPRA-205ENST00000399903 LRRC43Q8N309 656 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 FAM47BQ8NA70 645 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 CATSPER1Q8NEC5 780 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 MAPK15Q8TD08 544 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 PDCD6IPQ8WUM4 868 aaKnown RBP17.47■□□□□ 0.39
PTPRA-205ENST00000399903 DCPSQ96C86 337 aaKnown RBP17.47■□□□□ 0.39
PTPRA-205ENST00000399903 PCDHAC1Q9H158 963 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 TMEM216Q9P0N5 145 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 LSM1O15116 133 aaKnown RBP17.47■□□□□ 0.39
PTPRA-205ENST00000399903 SPAG6O75602 509 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 CDK9P50750 372 aaKnown RBP17.47■□□□□ 0.39
PTPRA-205ENST00000399903 GSTM4Q03013 218 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 BTG3Q14201 252 aaPredicted RBP17.47■□□□□ 0.39
PTPRA-205ENST00000399903 XKR3Q5GH77 459 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 C6orf183Q5T699 404 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 GPR107Q5VW38 600 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 LAYNQ6UX15 382 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 NANOGNBQ7Z5D8 188 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 GPC2Q8N158 579 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 LRTOMTQ8WZ04 291 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 COX4I2Q96KJ9 171 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 PCYT2Q99447 389 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 NPAS2Q99743 824 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 KLC2Q9H0B6 622 aa17.47■□□□□ 0.39
PTPRA-205ENST00000399903 K7EPI3 171 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 APOC4-APOC2K7ER74 178 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 TPST1O60507 370 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 E2F6O75461 281 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 APOC2P02655 101 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 TCF7P36402 384 aaPredicted RBP17.46■□□□□ 0.39
PTPRA-205ENST00000399903 CCR10P46092 362 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 NUP107P57740 925 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 DCAF6Q58WW2 860 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 MTX3Q5HYI7 312 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 LRRC38Q5VT99 294 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 Q6ZNX1 250 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 ARCQ7LC44 396 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 ARFGAP1Q8N6T3 406 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 DQX1Q8TE96 717 aaKnown RBP17.46■□□□□ 0.39
PTPRA-205ENST00000399903 SLC7A3Q8WY07 619 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 C12orf42Q96LP6 360 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 SPATC1LQ9H0A9 340 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 RNF11Q9Y3C5 154 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 C7orf72A4D263 438 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 PLOD2O00469 737 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 CKMT2P17540 419 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 NFKBIAP25963 317 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 PIK3R1P27986 724 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 ABCE1P61221 599 aaKnown RBP17.46■□□□□ 0.39
PTPRA-205ENST00000399903 CEACAM7Q14002 265 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 CROCCP3Q8IVE0 287 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 UBR7Q8N806 425 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 MCPH1Q8NEM0 835 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 SLC35B4Q969S0 331 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 C12orf43Q96C57 262 aaKnown RBP17.46■□□□□ 0.39
PTPRA-205ENST00000399903 KLHL32Q96NJ5 620 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 DHX35Q9H5Z1 703 aaKnown RBP17.46■□□□□ 0.39
PTPRA-205ENST00000399903 TCF7L2Q9NQB0 619 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 RIMS3Q9UJD0 308 aa17.46■□□□□ 0.39
PTPRA-205ENST00000399903 MCF2P10911 925 aa17.46■□□□□ 0.38
PTPRA-205ENST00000399903 MX2P20592 715 aa17.46■□□□□ 0.38
PTPRA-205ENST00000399903 SOX11P35716 441 aa17.46■□□□□ 0.38
PTPRA-205ENST00000399903 BNIP3Q12983 259 aa17.46■□□□□ 0.38
PTPRA-205ENST00000399903 APOFQ13790 326 aa17.46■□□□□ 0.38
PTPRA-205ENST00000399903 ADCY4Q8NFM4 1077 aa17.46■□□□□ 0.38
PTPRA-205ENST00000399903 MSTO1Q9BUK6 570 aa17.46■□□□□ 0.38
PTPRA-205ENST00000399903 A0A1W2PPW3 197 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 WDR27A2RRH5 827 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 SLC15A5A6NIM6 579 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 C3orf70A6NLC5 250 aaPredicted RBP17.45■□□□□ 0.38
PTPRA-205ENST00000399903 PMM2O15305 246 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 BIRC5O15392 142 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 CBFA2T3O75081 653 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 CST3P01034 146 aaPredicted RBP17.45■□□□□ 0.38
PTPRA-205ENST00000399903 GTF2A2P52657 109 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 KCNJ11Q14654 390 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 DENND1BQ6P3S1 775 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms