RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 PAFAH1B3Q15102 231 aaKnown RBP13.42□□□□□ -0.26
PRAME-201ENST00000398741 SV2CQ496J9 727 aa13.42□□□□□ -0.26
PRAME-201ENST00000398741 PDZD4Q76G19 769 aaPredicted RBP13.42□□□□□ -0.26
PRAME-201ENST00000398741 MAVSQ7Z434 540 aa13.42□□□□□ -0.26
PRAME-201ENST00000398741 STRA8Q7Z7C7 330 aa13.42□□□□□ -0.26
PRAME-201ENST00000398741 CMC1Q7Z7K0 106 aa13.42□□□□□ -0.26
PRAME-201ENST00000398741 SIX6OS1Q8N1H7 587 aa13.42□□□□□ -0.26
PRAME-201ENST00000398741 DCLK2Q8N568 766 aa13.42□□□□□ -0.26
PRAME-201ENST00000398741 DNAAF3Q8N9W5 541 aa13.42□□□□□ -0.26
PRAME-201ENST00000398741 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.42□□□□□ -0.262e-8■■■□□ 18.9
PRAME-201ENST00000398741 OR52K1Q8NGK4 314 aa13.42□□□□□ -0.26
PRAME-201ENST00000398741 AGAP3Q96P47 875 aa13.42□□□□□ -0.26
PRAME-201ENST00000398741 NR1H4Q96RI1 486 aaPredicted RBP13.42□□□□□ -0.26
PRAME-201ENST00000398741 ADAMTS10Q9H324 1103 aa13.42□□□□□ -0.26
PRAME-201ENST00000398741 LRRC4Q9HBW1 653 aa13.42□□□□□ -0.26
PRAME-201ENST00000398741 GDAP2Q9NXN4 497 aa13.42□□□□□ -0.26
PRAME-201ENST00000398741 KLK14Q9P0G3 267 aa13.42□□□□□ -0.26
PRAME-201ENST00000398741 CDY2AQ9Y6F7 541 aa13.42□□□□□ -0.26
PRAME-201ENST00000398741 CDY1Q9Y6F8 540 aa13.42□□□□□ -0.26
PRAME-201ENST00000398741 CITO14578 2027 aa13.42□□□□□ -0.26
PRAME-201ENST00000398741 CCDC189A1A4V9 331 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 KCNK1O00180 336 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 HSPA4LO95757 839 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 PRKCGP05129 697 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 MMP3P08254 477 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 HARS2P49590 506 aaKnown RBP13.41□□□□□ -0.26
PRAME-201ENST00000398741 PSEN1P49768 467 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 PITX1P78337 314 aaPredicted RBP13.41□□□□□ -0.26
PRAME-201ENST00000398741 CDC42EP1Q00587 391 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 RALGPS1Q5JS13 557 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 VWA5B1Q5TIE3 1220 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 OR52E8Q6IFG1 317 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 ALKAL1Q6UXT8 129 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 B3GALNT2Q8NCR0 500 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 GPRC5AQ8NFJ5 357 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 OR6J1Q8NGC5 347 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 GATA6Q92908 595 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 RBBP8Q99708 897 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 SHCBP1LQ9BZQ2 653 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 CYP4F11Q9HBI6 524 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 S100A14Q9HCY8 104 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 ZNF358Q9NW07 568 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 BFARQ9NZS9 450 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 GJD2Q9UKL4 321 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 VANGL2Q9ULK5 521 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 SMIM28A0A1B0GU29 152 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 RRN3P2A6NIE6 340 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 CCNT2O60583 730 aaKnown RBP13.41□□□□□ -0.26
PRAME-201ENST00000398741 USP12O75317 370 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 ZNF189O75820 626 aaPredicted RBP13.41□□□□□ -0.26
PRAME-201ENST00000398741 UBTFL6P0CB48 400 aaPredicted RBP13.41□□□□□ -0.26
PRAME-201ENST00000398741 ALOX15P16050 662 aaPredicted RBP13.41□□□□□ -0.26
PRAME-201ENST00000398741 CRABP2P29373 138 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 OLIG2Q13516 323 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 DGKDQ16760 1214 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 FSCBQ5H9T9 825 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 OTUD1Q5VV17 481 aaPredicted RBP13.41□□□□□ -0.26
PRAME-201ENST00000398741 SLC26A7Q8TE54 656 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 PYDC1Q8WXC3 89 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 WNT8BQ93098 351 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 FCRL3Q96P31 734 aaPredicted RBP13.41□□□□□ -0.26
PRAME-201ENST00000398741 NPY6RQ99463 290 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 DUSP16Q9BY84 665 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 CDHR5Q9HBB8 845 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 DDX43Q9NXZ2 648 aaKnown RBP13.41□□□□□ -0.26
PRAME-201ENST00000398741 PIN4Q9Y237 131 aaKnown RBP13.41□□□□□ -0.26
PRAME-201ENST00000398741 SCN1AP35498 2009 aa13.41□□□□□ -0.26
PRAME-201ENST00000398741 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.4□□□□□ -0.26
PRAME-201ENST00000398741 AHCYL1O43865 530 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 GPR32O75388 356 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 PDE5AO76074 875 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 GMPRP36959 345 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 LIMK2P53671 638 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 ASPHQ12797 758 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 CDC16Q13042 620 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 CUL3Q13618 768 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 DPYSQ14117 519 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 RNF220Q5VTB9 566 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 TNS4Q8IZW8 715 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 JADE3Q92613 823 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 CCDC124Q96CT7 223 aaKnown RBP13.4□□□□□ -0.26
PRAME-201ENST00000398741 HNRNPABQ99729 332 aaKnown RBP13.4□□□□□ -0.26
PRAME-201ENST00000398741 MED10Q9BTT4 135 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 VCX3BQ9H321 246 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 GOLGA2P5Q9HBQ8 144 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 PDP2Q9P2J9 529 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 ASB3Q9Y575 518 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 PCDHB12Q9Y5F1 795 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 LOC100653049A0A140TA62 436 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 CLDN5O00501 218 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 KRT34O76011 436 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 AP2A1O95782 977 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 MPOP05164 745 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 FESP07332 822 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 NPR3P17342 541 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 PTPN3P26045 913 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 ARRB2P32121 409 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 ATG14Q6ZNE5 492 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 ADGRG6Q86SQ4 1221 aa13.4□□□□□ -0.26
PRAME-201ENST00000398741 DHDDSQ86SQ9 333 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms