RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 AMPD2Q01433 879 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 KLC1Q07866 573 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 RCN1Q15293 331 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 PKN2Q16513 984 aaKnown RBP11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 METTL6Q8TCB7 284 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 ZFP42Q96MM3 310 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 MIEF1Q9NQG6 463 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 SOX13Q9UN79 622 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 ENO4A6NNW6 628 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 NCAM2O15394 837 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 AMHP03971 560 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 CHI3L1P36222 383 aaPredicted RBP11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 TBL3Q12788 808 aaKnown RBP11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 MAP2K5Q13163 448 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 IYDQ6PHW0 289 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 GLT6D1Q7Z4J2 308 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 STX19Q8N4C7 294 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 NLGN2Q8NFZ4 835 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 DNAJC19Q96DA6 116 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 SPACA7Q96KW9 195 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 CATSPER2Q96P56 530 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 TBCBQ99426 244 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 CD248Q9HCU0 757 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 UBA2Q9UBT2 640 aaPredicted RBP11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 TJP1Q07157 1748 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 LOC102724159A0A0B4J2E5 919 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 HOXC6P09630 235 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 TPBGLP0DKB5 382 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 VCLP18206 1134 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 TNNI3P19429 210 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 ATP6V1B2P21281 511 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 GP5P40197 560 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 HNF4AP41235 474 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 PRKCQQ04759 706 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 FAAP100Q0VG06 881 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 MMRN1Q13201 1228 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 PWP2Q15269 919 aaKnown RBP11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 FNDC3BQ53EP0 1204 aaKnown RBP11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 MIIPQ5JXC2 388 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 PLEKHM3Q6ZWE6 761 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 SETD3Q86TU7 594 aaPredicted RBP11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 PLD3Q8IV08 490 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 WNT8BQ93098 351 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 EMID1Q96A84 441 aaPredicted RBP11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 KCNMB3Q9NPA1 279 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 FBXL21Q9UKT6 434 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 SIK3Q9Y2K2 1263 aa11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 MRPS23Q9Y3D9 190 aaKnown RBP11.77□□□□□ -0.53
PCDHGA8-201ENST00000398604 ASTN2O75129 1339 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 WDR47O94967 919 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 MAPTP10636 758 aaKnown RBP11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 MARCKSL1P49006 195 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 CCNG1P51959 295 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 CHRNB3Q05901 458 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 CNTN1Q12860 1018 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 PACS2Q86VP3 889 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 ZNF786Q8N393 782 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 C3orf20Q8ND61 904 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 SUSD6Q92537 303 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 CCT7Q99832 543 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 NXF3Q9H4D5 531 aaKnown RBP11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 SLC40A1Q9NP59 571 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 NMRK1Q9NWW6 199 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 DLGAP2Q9P1A6 1054 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 ARMCX1Q9P291 453 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 KIAA0100Q14667 2235 aaKnown RBP11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 M0R3G1 203 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 FGRP09769 529 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 ZCCHC18P0CG32 403 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 RPS7P62081 194 aaKnown RBP11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 RASA2Q15283 850 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 REM2Q8IYK8 340 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 OR52K1Q8NGK4 314 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 KLRG1Q96E93 195 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 MAF1Q9H063 256 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 VPS45Q9NRW7 570 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 MRPL17Q9NRX2 175 aaKnown RBP11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 DPP7Q9UHL4 492 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 PCDHA3Q9Y5H8 950 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 C16orf96A6NNT2 1141 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 BTN3A1O00481 513 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 DNALI1O14645 258 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 RPLP2P05387 115 aaKnown RBP11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 CYP3A4P08684 503 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 THRAP10827 490 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 ADCK1Q86TW2 530 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 FBXO39Q8N4B4 442 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 CATSPER1Q8NEC5 780 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 CAVIN3Q969G5 261 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 SERAC1Q96JX3 654 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 MRPL9Q9BYD2 267 aaKnown RBP11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 PRDM12Q9H4Q4 367 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 ZDHHC6Q9H6R6 413 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 TMBIM4Q9HC24 238 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 NR2E3Q9Y5X4 410 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 UBIAD1Q9Y5Z9 338 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 SPACA6W5XKT8 324 aa11.76□□□□□ -0.53
PCDHGA8-201ENST00000398604 A0A0A6YYK5 440 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA8-201ENST00000398604 MAN1A2O60476 641 aa11.75□□□□□ -0.53
PCDHGA8-201ENST00000398604 XYLBO75191 536 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms