RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 NOMO2Q5JPE7 1267 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 PCID2Q5JVF3 399 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 FKBP9P1Q75LS8 142 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 TEKT4Q8WW24 435 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 MYLPFQ96A32 169 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 COG4Q9H9E3 785 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 C16orf96A6NNT2 1141 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 UBDO15205 165 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 CD52P31358 61 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 ATP5C1P36542 298 aaKnown RBP14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 PSEN1P49768 467 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 FAM35AQ86V20 835 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 FAM162AQ96A26 154 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 FTHL17Q9BXU8 183 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 PCDH18Q9HCL0 1135 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 DPP7Q9UHL4 492 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 BLOC1S6Q9UL45 172 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 IPPQ9Y573 584 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 PMM2O15305 246 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 FKBP6O75344 327 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 SOX11P35716 441 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 SP3Q02447 781 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 PTP4A2Q12974 167 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 GRIK3Q13003 919 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 PKN3Q6P5Z2 889 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 OR9Q1Q8NGQ5 310 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 JADE3Q92613 823 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 LPPQ93052 612 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 CEP19Q96LK0 163 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 EBNA1BP2Q99848 306 aaKnown RBP14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 SPATA16Q9BXB7 569 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 CD248Q9HCU0 757 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 SAR1AQ9NR31 198 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 KDM3BQ7LBC6 1761 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 GPR25O00155 361 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 ERVK-10P10266 1014 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 MYL4P12829 197 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 SERPINB3P29508 390 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 SERPINH1P50454 418 aaKnown RBP14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 HADHBP55084 474 aaKnown RBP14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 SDE2Q6IQ49 451 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 CHADLQ6NUI6 762 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 DCLRE1AQ6PJP8 1040 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 PHF21BQ96EK2 531 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 OTUB1Q96FW1 271 aaPredicted RBP14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 CERS2Q96G23 380 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 THUMPD3Q9BV44 507 aaKnown RBP14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 SIX2Q9NPC8 291 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 NMRK1Q9NWW6 199 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 NOCTQ9UK39 431 aaKnown RBP14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 DTNAQ9Y4J8 743 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 HSPA13P48723 471 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 PLD1Q13393 1074 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 TMEM154Q6P9G4 183 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 SLC51AQ86UW1 340 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 EXOC3L1Q86VI1 746 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 PDZD7Q9H5P4 517 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 GGA2Q9UJY4 613 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 STARD13Q9Y3M8 1113 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 SF3B1O75533 1304 aaKnown RBP eCLIP14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 NFKBIEO00221 500 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 LZTS3O60299 673 aaPredicted RBP14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 TSPAN3O60637 253 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 UTP6Q9NYH9 597 aaKnown RBP14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 SLC4A7Q9Y6M7 1214 aa14.51□□□□□ -0.09
PCDHGA11-201ENST00000398587 CARNS1A5YM72 827 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 GOLGA8TH3BQL2 631 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 CYP1A1P04798 512 aaPredicted RBP14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 ZNF7P17097 686 aaPredicted RBP14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 NFKB1P19838 968 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 AIF1P55008 147 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 DDX39BQ13838 428 aaKnown RBP14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 SLC25A52Q3SY17 297 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 AGKQ53H12 422 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 ZBTB10Q96DT7 871 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 PWWP2AQ96N64 755 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 CIPCQ9C0C6 399 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 TRIM17Q9Y577 477 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 PCDHA2Q9Y5H9 948 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 A0A0G2JLL6 359 aaPredicted RBP14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 KANSL1LA0AUZ9 987 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 MTA2O94776 668 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 PSMA4P25789 261 aaKnown RBP14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 DYNC1I2Q13409 638 aaKnown RBP14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 TUSC3Q13454 348 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 ANKS6Q68DC2 871 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 FOXR1Q6PIV2 292 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 PRRT2Q7Z6L0 340 aaPredicted RBP14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 XYLT1Q86Y38 959 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 KYQ8NBH2 561 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 ACMSDQ8TDX5 336 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 NKD2Q969F2 451 aaPredicted RBP14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 PHACTR1Q9C0D0 580 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 ADNPQ9H2P0 1102 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 TMEM39AQ9NV64 488 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 MORF4L1Q9UBU8 362 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 LRCH4O75427 683 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 ADSSP30520 456 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 PEX5P50542 639 aa14.5□□□□□ -0.09
PCDHGA11-201ENST00000398587 NOMO1Q15155 1222 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms