RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 ARL13BQ3SXY8 428 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 MAMSTRQ6ZN01 415 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 TFAP2DQ7Z6R9 452 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 ZNF513Q8N8E2 541 aaPredicted RBP16.24■□□□□ 0.19
MBD1-207ENST00000398488 NIPA2Q8N8Q9 360 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 KCTD15Q96SI1 283 aaPredicted RBP16.24■□□□□ 0.19
MBD1-207ENST00000398488 CIPCQ9C0C6 399 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 CACNA2D2Q9NY47 1150 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 UVRAGQ9P2Y5 699 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 SALL4Q9UJQ4 1053 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 OR51B4Q9Y5P0 310 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 DOCK4Q8N1I0 1966 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 CXCL12P48061 93 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 PXNP49023 591 aaPredicted RBP16.24■□□□□ 0.19
MBD1-207ENST00000398488 CDH4P55283 916 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 TAS2R40P59535 323 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 CSTF1Q05048 431 aaKnown RBP16.24■□□□□ 0.19
MBD1-207ENST00000398488 MTA1Q13330 715 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 ATP13A4Q4VNC1 1196 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 PITRM1Q5JRX3 1037 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 KCNT1Q5JUK3 1230 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 MBLAC2Q68D91 279 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 NLRP14Q86W24 1093 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 TMEM51Q9NW97 253 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 IP6K2Q9UHH9 426 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 USP18Q9UMW8 372 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 AP4E1Q9UPM8 1137 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 TBC1D30Q9Y2I9 924 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 RAD54BQ9Y620 910 aa16.24■□□□□ 0.19
MBD1-207ENST00000398488 MUC22E2RYF6 1773 aaPredicted RBP16.23■□□□□ 0.19
MBD1-207ENST00000398488 TYW5A2RUC4 315 aaKnown RBP16.23■□□□□ 0.19
MBD1-207ENST00000398488 TMEM110-MUSTN1A8MSY1 372 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 MYO1FO00160 1098 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 LAMTOR5O43504 91 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 RNF8O76064 485 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 PROSCO94903 275 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 PCK1P35558 622 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 CYLC1P35663 651 aaPredicted RBP16.23■□□□□ 0.19
MBD1-207ENST00000398488 IL12RB1P42701 662 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 SLC25A11Q02978 314 aaKnown RBP16.23■□□□□ 0.19
MBD1-207ENST00000398488 PIGHQ14442 188 aaPredicted RBP16.23■□□□□ 0.19
MBD1-207ENST00000398488 DMC1Q14565 340 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 ZNF234Q14588 700 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 SMTNL2Q2TAL5 461 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 EFHC2Q5JST6 749 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 ERMARDQ5T6L9 678 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 TTC39BQ5VTQ0 682 aaPredicted RBP16.23■□□□□ 0.19
MBD1-207ENST00000398488 KIAA1211LQ6NV74 962 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 LRRC31Q6UY01 552 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 TTC17Q96AE7 1141 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 MYO19Q96H55 970 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 MRGPRX3Q96LB0 322 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 HHIPQ96QV1 700 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 DESI2Q9BSY9 194 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 ZYG11BQ9C0D3 744 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 LACRTQ9GZZ8 138 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 MTG2Q9H4K7 406 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 DHX35Q9H5Z1 703 aaKnown RBP16.23■□□□□ 0.19
MBD1-207ENST00000398488 ZWILCHQ9H900 591 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 CD248Q9HCU0 757 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 KIAA1522Q9P206 1035 aaPredicted RBP16.23■□□□□ 0.19
MBD1-207ENST00000398488 THAP10Q9P2Z0 257 aaPredicted RBP16.23■□□□□ 0.19
MBD1-207ENST00000398488 PPARGC1AQ9UBK2 798 aaKnown RBP16.23■□□□□ 0.19
MBD1-207ENST00000398488 INTUQ9ULD6 942 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 MMP17Q9ULZ9 603 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 DUSP10Q9Y6W6 482 aa16.23■□□□□ 0.19
MBD1-207ENST00000398488 MUC6Q6W4X9 2439 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.22■□□□□ 0.19
MBD1-207ENST00000398488 A0A0D9SEW6 157 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 A0A1W2PQF6 199 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 CREB3O43889 395 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 CLDN11O75508 207 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 MTA2O94776 668 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 SP9P0CG40 484 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 RARAP10276 462 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 PRKCHP24723 683 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 L1CAMP32004 1257 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 ZNF177Q13360 481 aaPredicted RBP16.22■□□□□ 0.19
MBD1-207ENST00000398488 MESDQ14696 234 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 TCEAL1Q15170 157 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 PLEKHG6Q3KR16 790 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 PREPLQ4J6C6 727 aaPredicted RBP16.22■□□□□ 0.19
MBD1-207ENST00000398488 RNF219Q5W0B1 726 aaPredicted RBP16.22■□□□□ 0.19
MBD1-207ENST00000398488 RWDD4Q6NW29 188 aaKnown RBP16.22■□□□□ 0.19
MBD1-207ENST00000398488 SYT13Q7L8C5 426 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 AHI1Q8N157 1196 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 ZNF366Q8N895 744 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 RFFLQ8WZ73 363 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 PSMB7Q99436 277 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 FEM1AQ9BSK4 669 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 HYOU1Q9Y4L1 999 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 STON1Q9Y6Q2 735 aa16.22■□□□□ 0.19
MBD1-207ENST00000398488 PRPSAP2O60256 369 aa16.21■□□□□ 0.19
MBD1-207ENST00000398488 HLA-EP13747 358 aa16.21■□□□□ 0.19
MBD1-207ENST00000398488 CCR3P51677 355 aa16.21■□□□□ 0.19
MBD1-207ENST00000398488 PLK1P53350 603 aa16.21■□□□□ 0.19
MBD1-207ENST00000398488 NUBP1P53384 320 aa16.21■□□□□ 0.19
MBD1-207ENST00000398488 ENPP2Q13822 863 aa16.21■□□□□ 0.19
MBD1-207ENST00000398488 ACAP1Q15027 740 aa16.21■□□□□ 0.19
MBD1-207ENST00000398488 CRY1Q16526 586 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms