RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 CACNG4Q9UBN1 327 aa2.23□□□□□ -2.05
HMGN2P39-201ENST00000398005 DNAJB9Q9UBS3 223 aa2.23□□□□□ -2.05
HMGN2P39-201ENST00000398005 VPS51Q9UID3 782 aa2.23□□□□□ -2.05
HMGN2P39-201ENST00000398005 HOOK1Q9UJC3 728 aaKnown RBP2.23□□□□□ -2.05
HMGN2P39-201ENST00000398005 VAV3Q9UKW4 847 aa2.23□□□□□ -2.05
HMGN2P39-201ENST00000398005 MKLN1Q9UL63 735 aa2.23□□□□□ -2.05
HMGN2P39-201ENST00000398005 NENFQ9UMX5 172 aa2.23□□□□□ -2.05
HMGN2P39-201ENST00000398005 OSGIN2Q9Y236 505 aa2.23□□□□□ -2.05
HMGN2P39-201ENST00000398005 ADAM18Q9Y3Q7 739 aa2.23□□□□□ -2.05
HMGN2P39-201ENST00000398005 ATP6V0A2Q9Y487 856 aa2.23□□□□□ -2.05
HMGN2P39-201ENST00000398005 SESN1Q9Y6P5 492 aa2.23□□□□□ -2.05
HMGN2P39-201ENST00000398005 FPGT-TNNI3KV9GXZ4 949 aa2.23□□□□□ -2.05
HMGN2P39-201ENST00000398005 A0A1W2PRV1 198 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 A4D1N5 150 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 A6NL46 340 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 LRRC53A6NM62 1247 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 KCNJ18B7U540 433 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 PLOD2O00469 737 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 ZNF213O14771 459 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 CAPN9O14815 690 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 ZNF263O14978 683 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 PER2O15055 1255 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 PGRMC2O15173 223 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 PJA2O43164 708 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 CTIFO43310 598 aaKnown RBP2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 KINO60870 393 aaKnown RBP2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 CYP7B1O75881 506 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 WDR47O94967 919 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 REC8O95072 547 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 OR2C1O95371 312 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 PNPP00491 289 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 C8BP07358 591 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 TUBBP07437 444 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 GLI1P08151 1106 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 DLDP09622 509 aaKnown RBP2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 C1SP09871 688 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 PRR35P0CG20 571 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 ERCC2P18074 760 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 GABRB1P18505 474 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 SLC6A2P23975 617 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 EPHA3P29320 983 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 UQCRC1P31930 480 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 CPOXP36551 454 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 PBX1P40424 430 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 PEX19P40855 299 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 PRKCIP41743 596 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 MATR3P43243 847 aaKnown RBP eCLIP2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 CCR10P46092 362 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 GCLCP48506 637 aaPredicted RBP2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 GATMP50440 423 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 ZNF132P52740 706 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 ZNF134P52741 427 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 POLGP54098 1239 aaPredicted RBP2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 SLC12A3P55017 1021 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 RRADP55042 308 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 NPEPPSP55786 919 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 ERVFRD-1P60508 538 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 RPL15P61313 204 aaKnown RBP2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 ARHGAP8P85298 464 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 ATP2C1P98194 919 aaPredicted RBP2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 CEBPZQ03701 1054 aaKnown RBP2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 ZNF844Q08AG5 666 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 KLHL30Q0D2K2 578 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 TMEM62Q0P6H9 643 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 RPA4Q13156 261 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 FZD5Q13467 585 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 PTK6Q13882 451 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 SNTB1Q13884 538 aaKnown RBP2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 CBFBQ13951 182 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 CCNIQ14094 377 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 E2F2Q14209 437 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 KCNJ12Q14500 433 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 PCLAFQ15004 111 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 ACAP1Q15027 740 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 EIF4HQ15056 248 aaKnown RBP2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 CPSF6Q16630 551 aaKnown RBP eCLIP2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 GSTA3Q16772 222 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 AAK1Q2M2I8 961 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 PLEKHN1Q494U1 663 aaPredicted RBP2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 ANKDD1AQ495B1 522 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 IGSF11Q5DX21 431 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 NHSL2Q5HYW2 709 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 GLRA4Q5JXX5 417 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 MPP7Q5T2T1 576 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 CERCAMQ5T4B2 595 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 ARHGAP40Q5TG30 622 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 TMEM132EQ6IEE7 984 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 CCDC144NLQ6NUI1 221 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 TAPT1Q6NXT6 567 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 TMEM81Q6P7N7 255 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 TRMT10BQ6PF06 316 aaKnown RBP2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 SUSD1Q6UWL2 747 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 OLFM4Q6UX06 510 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 TMEM108Q6UXF1 575 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 OTOAQ7RTW8 1153 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 SLC46A3Q7Z3Q1 461 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 KBTBD6Q86V97 674 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 ARHGEF25Q86VW2 580 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 ANKRD13BQ86YJ7 626 aa2.22□□□□□ -2.05
HMGN2P39-201ENST00000398005 WFDC3Q8IUB2 231 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms