RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 NR2E3Q9Y5X4 410 aa17.75■□□□□ 0.43
EWSR1-206ENST00000397938 AK5Q9Y6K8 562 aa17.75■□□□□ 0.43
EWSR1-206ENST00000397938 GOLGA8QA0A0J9YX86 632 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 GOLGA8OA6NCC3 632 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 GOLGA8NF8WBI6 632 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 PFKMP08237 780 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 P4HA1P13674 534 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 MSX2P35548 267 aaPredicted RBP17.74■□□□□ 0.43
EWSR1-206ENST00000397938 GALK1P51570 392 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 PKNOX1P55347 436 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 DPYSL2Q16555 572 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 GRTP1Q5TC63 336 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 IER5Q5VY09 327 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 LCLAT1Q6UWP7 414 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 TMEM192Q8IY95 271 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 DCLK2Q8N568 766 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 AGR3Q8TD06 166 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 RCN3Q96D15 328 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 CPNE1Q99829 537 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 NAT9Q9BTE0 207 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 EIF2B3Q9NR50 452 aaKnown RBP17.74■□□□□ 0.43
EWSR1-206ENST00000397938 SCAF8Q9UPN6 1271 aaKnown RBP17.74■□□□□ 0.43
EWSR1-206ENST00000397938 SLC22A2O15244 555 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 IL18RAPO95256 599 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 ERVK-10P10266 1014 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 RGS7P49802 495 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 OAZ1P54368 228 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 ACBD5Q5T8D3 534 aaPredicted RBP17.74■□□□□ 0.43
EWSR1-206ENST00000397938 ATF7IP2Q5U623 682 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 EEF1DP3Q658K8 133 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 SETD3Q86TU7 594 aaPredicted RBP17.74■□□□□ 0.43
EWSR1-206ENST00000397938 TMEM102Q8N9M5 508 aaPredicted RBP17.74■□□□□ 0.43
EWSR1-206ENST00000397938 HTR3CQ8WXA8 447 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 PPP1R14BQ96C90 147 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 PDZD7Q9H5P4 517 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 WDR55Q9H6Y2 383 aaPredicted RBP17.74■□□□□ 0.43
EWSR1-206ENST00000397938 RPF1Q9H9Y2 349 aaKnown RBP17.74■□□□□ 0.43
EWSR1-206ENST00000397938 SYBUQ9NX95 663 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 ADAM28Q9UKQ2 775 aa17.74■□□□□ 0.43
EWSR1-206ENST00000397938 CNOT11Q9UKZ1 510 aaKnown RBP17.74■□□□□ 0.43
EWSR1-206ENST00000397938 PHIPQ8WWQ0 1821 aa17.73■□□□□ 0.43
EWSR1-206ENST00000397938 KPNA7A9QM74 516 aa17.73■□□□□ 0.43
EWSR1-206ENST00000397938 ONECUT3O60422 494 aaPredicted RBP17.73■□□□□ 0.43
EWSR1-206ENST00000397938 TRPA1O75762 1119 aa17.73■□□□□ 0.43
EWSR1-206ENST00000397938 BCAS2O75934 225 aaPredicted RBP17.73■□□□□ 0.43
EWSR1-206ENST00000397938 CDR2LQ86X02 465 aaPredicted RBP17.73■□□□□ 0.43
EWSR1-206ENST00000397938 CHERPQ8IWX8 916 aaKnown RBP17.73■□□□□ 0.43
EWSR1-206ENST00000397938 CXorf38Q8TB03 319 aa17.73■□□□□ 0.43
EWSR1-206ENST00000397938 PDCD6IPQ8WUM4 868 aaKnown RBP17.73■□□□□ 0.43
EWSR1-206ENST00000397938 NLRP7Q8WX94 980 aa17.73■□□□□ 0.43
EWSR1-206ENST00000397938 KHSRPQ92945 711 aaKnown RBP eCLIP17.73■□□□□ 0.433e-8■■■□□ 16.6
EWSR1-206ENST00000397938 GFM2Q969S9 779 aaKnown RBP17.73■□□□□ 0.43
EWSR1-206ENST00000397938 CERS2Q96G23 380 aa17.73■□□□□ 0.43
EWSR1-206ENST00000397938 KLHL32Q96NJ5 620 aa17.73■□□□□ 0.43
EWSR1-206ENST00000397938 DTLQ9NZJ0 730 aa17.73■□□□□ 0.43
EWSR1-206ENST00000397938 HESX1Q9UBX0 185 aa17.73■□□□□ 0.43
EWSR1-206ENST00000397938 A0A1B0GTW7 788 aa17.73■□□□□ 0.43
EWSR1-206ENST00000397938 SPDYE16A6NNV3 312 aaPredicted RBP17.73■□□□□ 0.43
EWSR1-206ENST00000397938 MATN2O00339 956 aa17.73■□□□□ 0.43
EWSR1-206ENST00000397938 H2AFYO75367 372 aaKnown RBP17.73■□□□□ 0.43
EWSR1-206ENST00000397938 ME2P23368 584 aa17.73■□□□□ 0.43
EWSR1-206ENST00000397938 DPP6P42658 865 aa17.73■□□□□ 0.43
EWSR1-206ENST00000397938 PPP2R5DQ14738 602 aa17.73■□□□□ 0.43
EWSR1-206ENST00000397938 LSM12Q3MHD2 195 aaKnown RBP17.73■□□□□ 0.43
EWSR1-206ENST00000397938 CPSF7Q8N684 471 aaKnown RBP17.73■□□□□ 0.43
EWSR1-206ENST00000397938 COLGALT1Q8NBJ5 622 aa17.73■□□□□ 0.43
EWSR1-206ENST00000397938 SREK1Q8WXA9 508 aaKnown RBP17.73■□□□□ 0.43
EWSR1-206ENST00000397938 USP13Q92995 863 aaPredicted RBP17.73■□□□□ 0.43
EWSR1-206ENST00000397938 HAUS8Q9BT25 410 aa17.73■□□□□ 0.43
EWSR1-206ENST00000397938 DHX35Q9H5Z1 703 aaKnown RBP17.73■□□□□ 0.43
EWSR1-206ENST00000397938 ZNF385DQ9H6B1 395 aa17.73■□□□□ 0.43
EWSR1-206ENST00000397938 VRTNQ9H8Y1 702 aa17.73■□□□□ 0.43
EWSR1-206ENST00000397938 MYO18AQ92614 2054 aaKnown RBP17.72■□□□□ 0.43
EWSR1-206ENST00000397938 NEMP1O14524 444 aa17.72■□□□□ 0.43
EWSR1-206ENST00000397938 CFLARO15519 480 aa17.72■□□□□ 0.43
EWSR1-206ENST00000397938 B4GALT5O43286 388 aa17.72■□□□□ 0.43
EWSR1-206ENST00000397938 TRIM13O60858 407 aa17.72■□□□□ 0.43
EWSR1-206ENST00000397938 ZNF23P17027 643 aa17.72■□□□□ 0.43
EWSR1-206ENST00000397938 PSMC3P17980 439 aa17.72■□□□□ 0.43
EWSR1-206ENST00000397938 MPSTP25325 297 aa17.72■□□□□ 0.43
EWSR1-206ENST00000397938 NDST1P52848 882 aa17.72■□□□□ 0.43
EWSR1-206ENST00000397938 PPIDQ08752 370 aaKnown RBP17.72■□□□□ 0.43
EWSR1-206ENST00000397938 RBBP8Q99708 897 aa17.72■□□□□ 0.43
EWSR1-206ENST00000397938 C2orf40Q9H1Z8 148 aa17.72■□□□□ 0.43
EWSR1-206ENST00000397938 CDT1Q9H211 546 aa17.72■□□□□ 0.43
EWSR1-206ENST00000397938 ACAD9Q9H845 621 aa17.72■□□□□ 0.43
EWSR1-206ENST00000397938 WDR41Q9HAD4 459 aa17.72■□□□□ 0.43
EWSR1-206ENST00000397938 RSL24D1Q9UHA3 163 aaKnown RBP17.72■□□□□ 0.43
EWSR1-206ENST00000397938 BARX2Q9UMQ3 279 aaPredicted RBP17.72■□□□□ 0.43
EWSR1-206ENST00000397938 GOLGB1Q14789 3259 aaKnown RBP17.72■□□□□ 0.43
EWSR1-206ENST00000397938 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.72■□□□□ 0.43
EWSR1-206ENST00000397938 ENO3P13929 434 aaPredicted RBP17.72■□□□□ 0.43
EWSR1-206ENST00000397938 ATICP31939 592 aa17.72■□□□□ 0.43
EWSR1-206ENST00000397938 PPARGP37231 505 aaPredicted RBP17.72■□□□□ 0.43
EWSR1-206ENST00000397938 MLH1P40692 756 aa17.72■□□□□ 0.43
EWSR1-206ENST00000397938 STAT5BP51692 787 aa17.72■□□□□ 0.43
EWSR1-206ENST00000397938 MXD4Q14582 209 aaPredicted RBP17.72■□□□□ 0.43
EWSR1-206ENST00000397938 LPIN1Q14693 890 aa17.72■□□□□ 0.43
EWSR1-206ENST00000397938 HERC3Q15034 1050 aa17.72■□□□□ 0.43
EWSR1-206ENST00000397938 PDK1Q15118 436 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms