RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ATP5BP06576 529 aaKnown RBP9.8□□□□□ -0.84
NEDD9-203ENST00000397378 NEFLP07196 543 aa9.8□□□□□ -0.84
NEDD9-203ENST00000397378 DLDP09622 509 aaKnown RBP9.8□□□□□ -0.84
NEDD9-203ENST00000397378 DUSP3P51452 185 aaPredicted RBP9.8□□□□□ -0.84
NEDD9-203ENST00000397378 GALCP54803 685 aa9.8□□□□□ -0.84
NEDD9-203ENST00000397378 DLG4P78352 724 aa9.8□□□□□ -0.84
NEDD9-203ENST00000397378 SFSWAPQ12872 951 aaKnown RBP9.8□□□□□ -0.84
NEDD9-203ENST00000397378 SRSF6Q13247 344 aaKnown RBP9.8□□□□□ -0.84
NEDD9-203ENST00000397378 TBR1Q16650 682 aa9.8□□□□□ -0.84
NEDD9-203ENST00000397378 RAB41Q5JT25 222 aa9.8□□□□□ -0.84
NEDD9-203ENST00000397378 PPP1R26Q5T8A7 1209 aaPredicted RBP9.8□□□□□ -0.84
NEDD9-203ENST00000397378 SPOPLQ6IQ16 392 aa9.8□□□□□ -0.84
NEDD9-203ENST00000397378 RSRC2Q7L4I2 434 aaKnown RBP9.8□□□□□ -0.84
NEDD9-203ENST00000397378 SPATS2Q86XZ4 545 aaKnown RBP9.8□□□□□ -0.84
NEDD9-203ENST00000397378 AHI1Q8N157 1196 aa9.8□□□□□ -0.84
NEDD9-203ENST00000397378 IQUBQ8NA54 791 aa9.8□□□□□ -0.84
NEDD9-203ENST00000397378 ZNF564Q8TBZ8 553 aaPredicted RBP9.8□□□□□ -0.84
NEDD9-203ENST00000397378 MAPK15Q8TD08 544 aa9.8□□□□□ -0.84
NEDD9-203ENST00000397378 UBXN6Q9BZV1 441 aa9.8□□□□□ -0.84
NEDD9-203ENST00000397378 DNAI2Q9GZS0 605 aa9.8□□□□□ -0.84
NEDD9-203ENST00000397378 RSPH9Q9H1X1 276 aaPredicted RBP9.8□□□□□ -0.84
NEDD9-203ENST00000397378 MAGEF1Q9HAY2 307 aa9.8□□□□□ -0.84
NEDD9-203ENST00000397378 ABCB8Q9NUT2 735 aa9.8□□□□□ -0.84
NEDD9-203ENST00000397378 FBXL12Q9NXK8 326 aa9.8□□□□□ -0.84
NEDD9-203ENST00000397378 TJP2Q9UDY2 1190 aa9.8□□□□□ -0.84
NEDD9-203ENST00000397378 STOML2Q9UJZ1 356 aa9.8□□□□□ -0.84
NEDD9-203ENST00000397378 PCDHGA8Q9Y5G5 932 aa9.8□□□□□ -0.84
NEDD9-203ENST00000397378 TLN1Q9Y490 2541 aaKnown RBP9.79□□□□□ -0.84
NEDD9-203ENST00000397378 PVALEFA0A1B0GWK0 134 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 PMS2P1A4D2B8 440 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 LATS1O95835 1130 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 HLA-DRAP01903 254 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 SLFN14P0C7P3 912 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 THEGLP0DJG4 465 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 PABPC1P11940 636 aaKnown RBP9.79□□□□□ -0.84
NEDD9-203ENST00000397378 CKMT1AP12532 417 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 PIK3CAP42336 1068 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 NASPP49321 788 aaPredicted RBP9.79□□□□□ -0.84
NEDD9-203ENST00000397378 HARS2P49590 506 aaKnown RBP9.79□□□□□ -0.84
NEDD9-203ENST00000397378 YWHAGP61981 247 aaKnown RBP eCLIP9.79□□□□□ -0.84
NEDD9-203ENST00000397378 CUL4AQ13619 759 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 KCNJ12Q14500 433 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 ADGRF1Q5T601 910 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 MBLAC2Q68D91 279 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 PM20D1Q6GTS8 502 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 CLEC14AQ86T13 490 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 ZC3H3Q8IXZ2 948 aaKnown RBP9.79□□□□□ -0.84
NEDD9-203ENST00000397378 OR2T34Q8NGX1 318 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 OR4C6Q8NH72 309 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 DHX58Q96C10 678 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 TMA16Q96EY4 203 aaKnown RBP9.79□□□□□ -0.84
NEDD9-203ENST00000397378 PRR11Q96HE9 360 aaPredicted RBP9.79□□□□□ -0.84
NEDD9-203ENST00000397378 IRX2Q9BZI1 471 aaPredicted RBP9.79□□□□□ -0.84
NEDD9-203ENST00000397378 PABPC3Q9H361 631 aaKnown RBP9.79□□□□□ -0.84
NEDD9-203ENST00000397378 SLC39A2Q9NP94 309 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 OLA1Q9NTK5 396 aaKnown RBP9.79□□□□□ -0.84
NEDD9-203ENST00000397378 GEMIN8Q9NWZ8 242 aaKnown RBP9.79□□□□□ -0.84
NEDD9-203ENST00000397378 SERGEFQ9UGK8 458 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 GGA2Q9UJY4 613 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 TPX2Q9ULW0 747 aaKnown RBP9.79□□□□□ -0.84
NEDD9-203ENST00000397378 HBS1LQ9Y450 684 aaKnown RBP9.79□□□□□ -0.84
NEDD9-203ENST00000397378 ENTPD2Q9Y5L3 495 aa9.79□□□□□ -0.84
NEDD9-203ENST00000397378 ZFC3H1O60293 1989 aaKnown RBP9.79□□□□□ -0.84
NEDD9-203ENST00000397378 A0A1W2PP55 124 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 MAGEC1O60732 1142 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 PPP6R2O75170 966 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 RNASEH2AO75792 299 aaKnown RBP9.78□□□□□ -0.84
NEDD9-203ENST00000397378 KIF20AO95235 890 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 GP1BAP07359 652 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 ALPPL2P10696 532 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 POLR2EP19388 210 aaKnown RBP9.78□□□□□ -0.84
NEDD9-203ENST00000397378 SYT1P21579 422 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 ELAVL4P26378 380 aaKnown RBP9.78□□□□□ -0.84
NEDD9-203ENST00000397378 CASRP41180 1078 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 CCR5P51681 352 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 ARID5BQ14865 1188 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 CLCA4Q14CN2 919 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 TGIF1Q15583 401 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 C1orf220Q5T0J3 134 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 MPP7Q5T2T1 576 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 ERICH6BQ5W0A0 696 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 SLC25A45Q8N413 288 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 ZNF557Q8N988 423 aaPredicted RBP9.78□□□□□ -0.84
NEDD9-203ENST00000397378 ZSCAN1Q8NBB4 408 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 LINC00301Q8NCQ3 95 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 ARRDC3Q96B67 414 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 MYO19Q96H55 970 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 APOLD1Q96LR9 279 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 OMDQ99983 421 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 IMPG2Q9BZV3 1241 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 NIF3L1Q9GZT8 377 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 APOBEC3GQ9HC16 384 aaKnown RBP9.78□□□□□ -0.84
NEDD9-203ENST00000397378 TMPRSS4Q9NRS4 437 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 EVA1BQ9NVM1 165 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 FZD4Q9ULV1 537 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 PLAAQ9Y263 795 aa9.78□□□□□ -0.84
NEDD9-203ENST00000397378 COL27A1Q8IZC6 1860 aaPredicted RBP9.77□□□□□ -0.85
NEDD9-203ENST00000397378 SPTBN1Q01082 2364 aaKnown RBP9.77□□□□□ -0.85
NEDD9-203ENST00000397378 MAPK13O15264 365 aa9.77□□□□□ -0.85
NEDD9-203ENST00000397378 RNASEH1O60930 286 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms