RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 USP41Q3LFD5 358 aa15.57■□□□□ 0.08
MCF2L-205ENST00000397017 TRNP1Q6NT89 227 aa15.57■□□□□ 0.08
MCF2L-205ENST00000397017 ARID3BQ8IVW6 561 aaPredicted RBP15.57■□□□□ 0.08
MCF2L-205ENST00000397017 HIPK4Q8NE63 616 aa15.57■□□□□ 0.08
MCF2L-205ENST00000397017 OR6K2Q8NGY2 324 aa15.57■□□□□ 0.08
MCF2L-205ENST00000397017 STK32AQ8WU08 396 aa15.57■□□□□ 0.08
MCF2L-205ENST00000397017 PIK3R5Q8WYR1 880 aa15.57■□□□□ 0.08
MCF2L-205ENST00000397017 TSSK1BQ9BXA7 367 aa15.57■□□□□ 0.08
MCF2L-205ENST00000397017 GTSE1Q9NYZ3 720 aa15.57■□□□□ 0.08
MCF2L-205ENST00000397017 FER1L6Q2WGJ9 1857 aa15.57■□□□□ 0.08
MCF2L-205ENST00000397017 CPA2P48052 419 aa15.57■□□□□ 0.08
MCF2L-205ENST00000397017 TTC39BQ5VTQ0 682 aaPredicted RBP15.57■□□□□ 0.08
MCF2L-205ENST00000397017 RNF219Q5W0B1 726 aaPredicted RBP15.57■□□□□ 0.08
MCF2L-205ENST00000397017 SPATA6LQ8N4H0 392 aa15.57■□□□□ 0.08
MCF2L-205ENST00000397017 MRPS31Q92665 395 aaKnown RBP15.57■□□□□ 0.08
MCF2L-205ENST00000397017 LRRC37BQ96QE4 947 aa15.57■□□□□ 0.08
MCF2L-205ENST00000397017 FRMD8P1Q9BZ68 369 aaPredicted RBP15.57■□□□□ 0.08
MCF2L-205ENST00000397017 VRTNQ9H8Y1 702 aa15.57■□□□□ 0.08
MCF2L-205ENST00000397017 OPHN1O60890 802 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 RHOCP08134 193 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 CDH5P33151 784 aaPredicted RBP15.56■□□□□ 0.08
MCF2L-205ENST00000397017 SIX1Q15475 284 aaPredicted RBP15.56■□□□□ 0.08
MCF2L-205ENST00000397017 HABP4Q5JVS0 413 aaKnown RBP15.56■□□□□ 0.08
MCF2L-205ENST00000397017 C6orf163Q5TEZ5 329 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 TRMT10BQ6PF06 316 aaKnown RBP15.56■□□□□ 0.08
MCF2L-205ENST00000397017 MON1AQ86VX9 555 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 ARHGAP18Q8N392 663 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 ERP27Q96DN0 273 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 PGM2Q96G03 612 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 UROC1Q96N76 676 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 ATP13A1Q9HD20 1204 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 TMEM161AQ9NX61 479 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 SMG5Q9UPR3 1016 aaKnown RBP15.56■□□□□ 0.08
MCF2L-205ENST00000397017 PCDHB12Q9Y5F1 795 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 KCNA4P22459 653 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 ARFIP2P53365 341 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 ASIC4Q96FT7 647 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 PSD3Q9NYI0 1048 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 CENPFP49454 3210 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 DPYSL4O14531 572 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 PHGDHO43175 533 aaKnown RBP15.56■□□□□ 0.08
MCF2L-205ENST00000397017 ECHS1P30084 290 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 CD86P42081 329 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 KLF1Q13351 362 aaPredicted RBP15.56■□□□□ 0.08
MCF2L-205ENST00000397017 C12orf50Q8NA57 414 aaPredicted RBP15.56■□□□□ 0.08
MCF2L-205ENST00000397017 GSDMBQ8TAX9 411 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 SGSM3Q96HU1 749 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 CORO1BQ9BR76 489 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 CINPQ9BW66 212 aaPredicted RBP15.56■□□□□ 0.08
MCF2L-205ENST00000397017 SYBUQ9NX95 663 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 ARHGEF38Q9NXL2 777 aa15.56■□□□□ 0.08
MCF2L-205ENST00000397017 LSM7Q9UK45 103 aaKnown RBP15.56■□□□□ 0.08
MCF2L-205ENST00000397017 ENPP3O14638 875 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 NUDT17P0C025 328 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 HDCP19113 662 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 EPHB3P54753 998 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 POU5F1Q01860 360 aaKnown RBP15.55■□□□□ 0.08
MCF2L-205ENST00000397017 ANKS3Q6ZW76 656 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 MPP5Q8N3R9 675 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 PQLC3Q8N755 202 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 LINC01465Q8N7H1 131 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 NIPA2Q8N8Q9 360 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 ATP6V1E2Q96A05 226 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 FAM129AQ9BZQ8 928 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 LRRC40Q9H9A6 602 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 CYP4F12Q9HCS2 524 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 SENP1Q9P0U3 644 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 AFF4Q9UHB7 1163 aaKnown RBP15.55■□□□□ 0.08
MCF2L-205ENST00000397017 H0Y3Z8 333 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 KIF3CO14782 793 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 MEFVO15553 781 aaPredicted RBP15.55■□□□□ 0.08
MCF2L-205ENST00000397017 UGT1A9O60656 530 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 LRPAP1P30533 357 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 ASPHQ12797 758 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 FBXW10Q5XX13 1052 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 ZNF567Q8N184 647 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 FBXO22Q8NEZ5 403 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 CCSER2Q9H7U1 834 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 UGT1A7Q9HAW7 530 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 UGT1A10Q9HAW8 530 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 UGT1A8Q9HAW9 530 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 ZMYND8Q9ULU4 1186 aaPredicted RBP15.55■□□□□ 0.08
MCF2L-205ENST00000397017 USP15Q9Y4E8 981 aaPredicted RBP15.55■□□□□ 0.08
MCF2L-205ENST00000397017 ALOX15BO15296 676 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 MTSS1O43312 755 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 AMHP03971 560 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 RECQLP46063 649 aaPredicted RBP15.55■□□□□ 0.08
MCF2L-205ENST00000397017 SMAD3P84022 425 aaKnown RBP15.55■□□□□ 0.08
MCF2L-205ENST00000397017 OASLQ15646 514 aaKnown RBP15.55■□□□□ 0.08
MCF2L-205ENST00000397017 ATG16L1Q676U5 607 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 NPAS4Q8IUM7 802 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 MAB21L3Q8N8X9 362 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 FZD10Q9ULW2 581 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 PHTF1Q9UMS5 762 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 CEP350Q5VT06 3117 aa15.55■□□□□ 0.08
MCF2L-205ENST00000397017 GPC4O75487 556 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 ANXA9O76027 345 aa15.54■□□□□ 0.08
MCF2L-205ENST00000397017 SPRP35270 261 aaPredicted RBP15.54■□□□□ 0.08
MCF2L-205ENST00000397017 TUFMP49411 452 aaKnown RBP15.54■□□□□ 0.08
MCF2L-205ENST00000397017 ALDH18A1P54886 795 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms