RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 ODF2Q5BJF6 829 aa14.07□□□□□ -0.16
GAPDH-204ENST00000396859 PPP6R3Q5H9R7 873 aaPredicted RBP14.07□□□□□ -0.16
GAPDH-204ENST00000396859 C6orf118Q5T5N4 469 aa14.07□□□□□ -0.16
GAPDH-204ENST00000396859 SDE2Q6IQ49 451 aa14.07□□□□□ -0.16
GAPDH-204ENST00000396859 TFAP2DQ7Z6R9 452 aa14.07□□□□□ -0.16
GAPDH-204ENST00000396859 SETD3Q86TU7 594 aaPredicted RBP14.07□□□□□ -0.16
GAPDH-204ENST00000396859 ZNF683Q8IZ20 524 aa14.07□□□□□ -0.16
GAPDH-204ENST00000396859 ZNF687Q8N1G0 1237 aa14.07□□□□□ -0.16
GAPDH-204ENST00000396859 PYROXD2Q8N2H3 581 aa14.07□□□□□ -0.16
GAPDH-204ENST00000396859 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.07□□□□□ -0.16
GAPDH-204ENST00000396859 TMEM105Q8N8V8 129 aa14.07□□□□□ -0.16
GAPDH-204ENST00000396859 PEBP4Q96S96 227 aa14.07□□□□□ -0.16
GAPDH-204ENST00000396859 LRFN3Q9BTN0 628 aa14.07□□□□□ -0.16
GAPDH-204ENST00000396859 MUC3BQ9H195 1237 aa14.07□□□□□ -0.16
GAPDH-204ENST00000396859 CHRDQ9H2X0 955 aa14.07□□□□□ -0.16
GAPDH-204ENST00000396859 SPATA6Q9NWH7 488 aaPredicted RBP14.07□□□□□ -0.16
GAPDH-204ENST00000396859 GPATCH2LQ9NWQ4 482 aa14.07□□□□□ -0.16
GAPDH-204ENST00000396859 MPP6Q9NZW5 540 aa14.07□□□□□ -0.16
GAPDH-204ENST00000396859 CLEC4EQ9ULY5 219 aa14.07□□□□□ -0.16
GAPDH-204ENST00000396859 REXO2Q9Y3B8 237 aaKnown RBP14.07□□□□□ -0.16
GAPDH-204ENST00000396859 FAM72CH0Y354 149 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 H3BRJ5 948 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 NPC1O15118 1278 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 FGF10O15520 208 aaPredicted RBP14.06□□□□□ -0.16
GAPDH-204ENST00000396859 PJA2O43164 708 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 KRT86O43790 486 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 CNTN5O94779 1100 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 CCDC175P0C221 793 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 CD70P32970 193 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 TIE1P35590 1138 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 NUBP1P53384 320 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 SLC25A11Q02978 314 aaKnown RBP14.06□□□□□ -0.16
GAPDH-204ENST00000396859 LMAN2Q12907 356 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 SMTNL2Q2TAL5 461 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 ALFQ53S48 1182 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 C2orf27AQ580R0 203 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 KCNT1Q5JUK3 1230 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 FAM72AQ5TYM5 149 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 MANEALQ5VSG8 457 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 DAB2IPQ5VWQ8 1189 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 RNF219Q5W0B1 726 aaPredicted RBP14.06□□□□□ -0.16
GAPDH-204ENST00000396859 MBLAC2Q68D91 279 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 FAM72DQ6L9T8 149 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 DAAM2Q86T65 1068 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 FAM72BQ86X60 149 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 MAP7D3Q8IWC1 876 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 ZNF513Q8N8E2 541 aaPredicted RBP14.06□□□□□ -0.16
GAPDH-204ENST00000396859 RPLP0P6Q8NHW5 317 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 WFDC5Q8TCV5 224 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 P2RY11Q96G91 374 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 PDLIM2Q96JY6 352 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.06□□□□□ -0.16
GAPDH-204ENST00000396859 ELOVL2Q9NXB9 296 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 TFR2Q9UP52 801 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 PLA2G4CQ9UP65 541 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 STARD13Q9Y3M8 1113 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 ADGRG1Q9Y653 693 aa14.06□□□□□ -0.16
GAPDH-204ENST00000396859 RCCD1A6NED2 376 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 CHURC1-FNTBB4DL54 471 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 PRRT4C9JH25 899 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 LAMTOR5O43504 91 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 BUB1O43683 1085 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 BUB1BO60566 1050 aaPredicted RBP14.05□□□□□ -0.16
GAPDH-204ENST00000396859 ASLP04424 464 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 RARAP10276 462 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 IL1R2P27930 398 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 ETFBP38117 255 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 CSKP41240 450 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 MAPKAPK2P49137 400 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 IRAK1P51617 712 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 CCR3P51677 355 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 ST8SIA6P61647 398 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 CCZ1BP86790 482 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 CCZ1P86791 482 aaPredicted RBP14.05□□□□□ -0.16
GAPDH-204ENST00000396859 SULT2A1Q06520 285 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 CCDC173Q0VFZ6 552 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 MESP2Q0VG99 397 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 FZD5Q13467 585 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 DPYSL2Q16555 572 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 FSCBQ5H9T9 825 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 PITRM1Q5JRX3 1037 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 EOGTQ5NDL2 527 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 C11orf63Q6NUN7 778 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 ZNF783Q6ZMS7 281 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 Q6ZS52 159 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 POLNQ7Z5Q5 900 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 KIAA0907Q7Z7F0 614 aaPredicted RBP14.05□□□□□ -0.16
GAPDH-204ENST00000396859 RHOT1Q8IXI2 618 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 CHPFQ8IZ52 775 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 SPEM1Q8N4L4 309 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 DTWD2Q8NBA8 298 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 KCTD6Q8NC69 237 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 USP33Q8TEY7 942 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 EZH1Q92800 747 aaPredicted RBP14.05□□□□□ -0.16
GAPDH-204ENST00000396859 KCTD15Q96SI1 283 aaPredicted RBP14.05□□□□□ -0.16
GAPDH-204ENST00000396859 TMEM248Q9NWD8 314 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 DLGAP2Q9P1A6 1054 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 VPS28Q9UK41 221 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 TBC1D30Q9Y2I9 924 aa14.05□□□□□ -0.16
GAPDH-204ENST00000396859 ILVBLA1L0T0 632 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms