RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 CYTH1Q15438 398 aa24.58■■□□□ 1.52
CSNK1E-203ENST00000396832 HSDL1Q3SXM5 330 aa24.58■■□□□ 1.52
CSNK1E-203ENST00000396832 STXBP5Q5T5C0 1151 aa24.58■■□□□ 1.52
CSNK1E-203ENST00000396832 CLEC4CQ8WTT0 213 aa24.58■■□□□ 1.52
CSNK1E-203ENST00000396832 LENG8Q96PV6 779 aaPredicted RBP24.58■■□□□ 1.52
CSNK1E-203ENST00000396832 EBNA1BP2Q99848 306 aaKnown RBP24.58■■□□□ 1.52
CSNK1E-203ENST00000396832 CDT1Q9H211 546 aa24.58■■□□□ 1.52
CSNK1E-203ENST00000396832 ALOX15P16050 662 aaPredicted RBP24.57■■□□□ 1.52
CSNK1E-203ENST00000396832 NUDT2P50583 147 aa24.57■■□□□ 1.52
CSNK1E-203ENST00000396832 PDE1CQ14123 709 aaPredicted RBP24.57■■□□□ 1.52
CSNK1E-203ENST00000396832 CMC1Q7Z7K0 106 aa24.57■■□□□ 1.52
CSNK1E-203ENST00000396832 BBS5Q8N3I7 341 aa24.57■■□□□ 1.52
CSNK1E-203ENST00000396832 TMIGD2Q96BF3 282 aa24.57■■□□□ 1.52
CSNK1E-203ENST00000396832 GPR25O00155 361 aa24.57■■□□□ 1.52
CSNK1E-203ENST00000396832 VARSP26640 1264 aaKnown RBP24.57■■□□□ 1.52
CSNK1E-203ENST00000396832 CREB5Q02930 508 aa24.57■■□□□ 1.52
CSNK1E-203ENST00000396832 TMEM126BQ8IUX1 230 aa24.57■■□□□ 1.52
CSNK1E-203ENST00000396832 TRIML2Q8N7C3 387 aa24.57■■□□□ 1.52
CSNK1E-203ENST00000396832 FLAD1Q8NFF5 587 aa24.57■■□□□ 1.52
CSNK1E-203ENST00000396832 SERPINI1Q99574 410 aa24.57■■□□□ 1.52
CSNK1E-203ENST00000396832 PKP2Q99959 881 aa24.57■■□□□ 1.52
CSNK1E-203ENST00000396832 PADI4Q9UM07 663 aa24.57■■□□□ 1.52
CSNK1E-203ENST00000396832 TMEM221A6NGB7 291 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 PTPRAP18433 802 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 CYP2F1P24903 491 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 GRK2P25098 689 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 PHKA2P46019 1235 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 PGGT1BP53609 377 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 ABCE1P61221 599 aaKnown RBP24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 SLC44A4Q53GD3 710 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 LRRC39Q96DD0 335 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 FAIMQ9NVQ4 179 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 SEPT10Q9P0V9 454 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 HACL1Q9UJ83 578 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 HCRTO43612 131 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 GLRA3O75311 464 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 THRAP10827 490 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 XRCC1P18887 633 aaPredicted RBP24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 EFNA5P52803 228 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 PMF1Q6P1K2 205 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 SMYD1Q8NB12 490 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 TSPAN14Q8NG11 270 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 KBTBD7Q8WVZ9 684 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 CDRT15Q96T59 188 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 CCT7Q99832 543 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 BCO2Q9BYV7 579 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 COG4Q9H9E3 785 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 PAIP2BQ9ULR5 123 aaKnown RBP24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 PARP14Q460N5 1801 aa24.56■■□□□ 1.52
CSNK1E-203ENST00000396832 BOLA2-SMG1P6H3BVE0 249 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 ENDOD1O94919 500 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 SERPINB5P36952 375 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 HSPA13P48723 471 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 THOP1P52888 689 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 AMHR2Q16671 573 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 GOLGA7BQ2TAP0 167 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 ZFP1Q6P2D0 407 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 KCNT2Q6UVM3 1135 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 AGBL3Q8NEM8 1001 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 CAMKK2Q96RR4 588 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 LGMNQ99538 433 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 ANK1P16157 1881 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 PSME4Q14997 1843 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 PHIPQ8WWQ0 1821 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 LCTP09848 1927 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 SYNJ2BP-COX16A0A087WUM0 186 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 STT3AP46977 705 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 POTEHQ6S545 545 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 PYROXD2Q8N2H3 581 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 ATP2A3Q93084 1043 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 COX16Q9P0S2 106 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 ZNF232Q9UNY5 417 aa24.55■■□□□ 1.52
CSNK1E-203ENST00000396832 GOLGA8QA0A0J9YX86 632 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 GOLGA8OA6NCC3 632 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 GOLGA8NF8WBI6 632 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 RALBP11234 206 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 CD97P48960 835 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 CDK9P50750 372 aaKnown RBP24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 ZBED3Q96IU2 234 aaPredicted RBP24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 SLC2A11Q9BYW1 496 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 XPNPEP3Q9NQH7 507 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 TBCCD1Q9NVR7 557 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 PRPF19Q9UMS4 504 aaKnown RBP24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 ARIH2O95376 493 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 ERVK-10P10266 1014 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 SLC9B1Q4ZJI4 515 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 RNF148Q8N7C7 305 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 HPDLQ96IR7 371 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 HAUS8Q9BT25 410 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 TMEM216Q9P0N5 145 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 PCDHA11Q9Y5I1 949 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 PSMC3P17980 439 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 MGAT1P26572 445 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 SDC4P31431 198 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 LPCAT2Q7L5N7 544 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 CROCCP3Q8IVE0 287 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 BHLHE22Q8NFJ8 381 aaPredicted RBP24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 NLRP7Q8WX94 980 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 RRN3Q9NYV6 651 aa24.54■■□□□ 1.52
CSNK1E-203ENST00000396832 RLFQ13129 1914 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms