RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 PKMYT1Q99640 499 aa16.98■□□□□ 0.31
TRIM39-205ENST00000396551 NAT9Q9BTE0 207 aa16.98■□□□□ 0.31
TRIM39-205ENST00000396551 MLPHQ9BV36 600 aaPredicted RBP16.98■□□□□ 0.31
TRIM39-205ENST00000396551 ARHGAP39Q9C0H5 1083 aa16.98■□□□□ 0.31
TRIM39-205ENST00000396551 WDCPQ9H6R7 721 aa16.98■□□□□ 0.31
TRIM39-205ENST00000396551 TLE6Q9H808 572 aa16.98■□□□□ 0.31
TRIM39-205ENST00000396551 ZFYVE28Q9HCC9 887 aa16.98■□□□□ 0.31
TRIM39-205ENST00000396551 ODC1P11926 461 aa16.97■□□□□ 0.31
TRIM39-205ENST00000396551 TRIM32Q13049 653 aa16.97■□□□□ 0.31
TRIM39-205ENST00000396551 KCTD11Q693B1 232 aa16.97■□□□□ 0.31
TRIM39-205ENST00000396551 PDZD4Q76G19 769 aaPredicted RBP16.97■□□□□ 0.31
TRIM39-205ENST00000396551 RASSF3Q86WH2 238 aa16.97■□□□□ 0.31
TRIM39-205ENST00000396551 HDAC11Q96DB2 347 aa16.97■□□□□ 0.31
TRIM39-205ENST00000396551 RRN3Q9NYV6 651 aa16.97■□□□□ 0.31
TRIM39-205ENST00000396551 GABRQQ9UN88 632 aa16.97■□□□□ 0.31
TRIM39-205ENST00000396551 RPS6KL1Q9Y6S9 549 aa16.97■□□□□ 0.31
TRIM39-205ENST00000396551 BIRC5O15392 142 aa16.97■□□□□ 0.31
TRIM39-205ENST00000396551 LRIG2O94898 1065 aa16.97■□□□□ 0.31
TRIM39-205ENST00000396551 ITGA2BP08514 1039 aa16.97■□□□□ 0.31
TRIM39-205ENST00000396551 GALNT2Q10471 571 aa16.97■□□□□ 0.31
TRIM39-205ENST00000396551 NAB1Q13506 487 aa16.97■□□□□ 0.31
TRIM39-205ENST00000396551 ARL13BQ3SXY8 428 aa16.97■□□□□ 0.31
TRIM39-205ENST00000396551 INTS6LQ5JSJ4 861 aaKnown RBP16.97■□□□□ 0.31
TRIM39-205ENST00000396551 ALYREFQ86V81 257 aaKnown RBP16.97■□□□□ 0.31
TRIM39-205ENST00000396551 LRRTM3Q86VH5 581 aa16.97■□□□□ 0.31
TRIM39-205ENST00000396551 CERS2Q96G23 380 aa16.97■□□□□ 0.31
TRIM39-205ENST00000396551 OR12D3Q9UGF7 316 aa16.97■□□□□ 0.31
TRIM39-205ENST00000396551 WFS1O76024 890 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 B3GAT3O94766 335 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 F9P00740 461 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 PRKCGP05129 697 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 CCND1P24385 295 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 GMPRP36959 345 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 THPOP40225 353 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 RASSF2P50749 326 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 RPAINQ86UA6 219 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 ARID3BQ8IVW6 561 aaPredicted RBP16.96■□□□□ 0.31
TRIM39-205ENST00000396551 OR10T2Q8NGX3 314 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 ACMSDQ8TDX5 336 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 DPF3Q92784 378 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 ACBD6Q9BR61 282 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 EBF2Q9HAK2 575 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 CASS4Q9NQ75 786 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 ZNF623O75123 536 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 CYP11A1P05108 521 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 POLBP06746 335 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 GARSP41250 739 aaKnown RBP16.96■□□□□ 0.31
TRIM39-205ENST00000396551 DSC3Q14574 896 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 SPANXN3Q5MJ09 141 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 N4BP2L1Q5TBK1 243 aaPredicted RBP16.96■□□□□ 0.31
TRIM39-205ENST00000396551 RGMBQ6NW40 437 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 ZSCAN18Q8TBC5 510 aaPredicted RBP16.96■□□□□ 0.31
TRIM39-205ENST00000396551 RAB3IL1Q8TBN0 382 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 IRGQQ8WZA9 623 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 GBA3Q9H227 469 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 F8W810 466 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 FCHO1O14526 889 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 NCAM2O15394 837 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 F7P08709 466 aaPredicted RBP16.96■□□□□ 0.31
TRIM39-205ENST00000396551 EZRP15311 586 aaKnown RBP16.96■□□□□ 0.31
TRIM39-205ENST00000396551 GM2AP17900 193 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 ZBTB16Q05516 673 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 STXBP5Q5T5C0 1151 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 KYAT3Q6YP21 454 aaKnown RBP16.96■□□□□ 0.31
TRIM39-205ENST00000396551 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.96■□□□□ 0.31
TRIM39-205ENST00000396551 DQX1Q8TE96 717 aaKnown RBP16.96■□□□□ 0.31
TRIM39-205ENST00000396551 NMUR2Q9GZQ4 415 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 KCNK4Q9NYG8 393 aa16.96■□□□□ 0.31
TRIM39-205ENST00000396551 ADAMTS4O75173 837 aa16.95■□□□□ 0.3
TRIM39-205ENST00000396551 ITGB1P05556 798 aa16.95■□□□□ 0.3
TRIM39-205ENST00000396551 NFKB1P19838 968 aa16.95■□□□□ 0.3
TRIM39-205ENST00000396551 PPM1JQ5JR12 505 aa16.95■□□□□ 0.3
TRIM39-205ENST00000396551 SAPCD2Q86UD0 394 aa16.95■□□□□ 0.3
TRIM39-205ENST00000396551 NSL1Q96IY1 281 aa16.95■□□□□ 0.3
TRIM39-205ENST00000396551 EPAS1Q99814 870 aa16.95■□□□□ 0.3
TRIM39-205ENST00000396551 NMRK2Q9NPI5 230 aa16.95■□□□□ 0.3
TRIM39-205ENST00000396551 ZFATQ9P243 1243 aa16.95■□□□□ 0.3
TRIM39-205ENST00000396551 MARCOQ9UEW3 520 aaPredicted RBP16.95■□□□□ 0.3
TRIM39-205ENST00000396551 VANGL2Q9ULK5 521 aa16.95■□□□□ 0.3
TRIM39-205ENST00000396551 NEU3Q9UQ49 428 aa16.95■□□□□ 0.3
TRIM39-205ENST00000396551 KITP10721 976 aa16.95■□□□□ 0.3
TRIM39-205ENST00000396551 FASTKD1Q53R41 847 aaKnown RBP16.95■□□□□ 0.3
TRIM39-205ENST00000396551 SCAMP5Q8TAC9 235 aa16.95■□□□□ 0.3
TRIM39-205ENST00000396551 ZNF669Q96BR6 464 aaPredicted RBP16.95■□□□□ 0.3
TRIM39-205ENST00000396551 CELF6Q96J87 481 aaKnown RBP16.95■□□□□ 0.3
TRIM39-205ENST00000396551 CADM1Q9BY67 442 aaKnown RBP16.95■□□□□ 0.3
TRIM39-205ENST00000396551 ZCWPW2A0A1B0GU75 182 aa16.94■□□□□ 0.3
TRIM39-205ENST00000396551 PLIN3O60664 434 aa16.94■□□□□ 0.3
TRIM39-205ENST00000396551 HNRNPCL1O60812 293 aaKnown RBP16.94■□□□□ 0.3
TRIM39-205ENST00000396551 GLRA3O75311 464 aa16.94■□□□□ 0.3
TRIM39-205ENST00000396551 SLC10A3P09131 477 aa16.94■□□□□ 0.3
TRIM39-205ENST00000396551 RPL10AP62906 217 aaKnown RBP16.94■□□□□ 0.3
TRIM39-205ENST00000396551 MBLAC2Q68D91 279 aa16.94■□□□□ 0.3
TRIM39-205ENST00000396551 SMC1BQ8NDV3 1235 aa16.94■□□□□ 0.3
TRIM39-205ENST00000396551 LRRC40Q9H9A6 602 aa16.94■□□□□ 0.3
TRIM39-205ENST00000396551 DMAP1Q9NPF5 467 aaPredicted RBP16.94■□□□□ 0.3
TRIM39-205ENST00000396551 ARMCX1Q9P291 453 aa16.94■□□□□ 0.3
TRIM39-205ENST00000396551 HBS1LQ9Y450 684 aaKnown RBP16.94■□□□□ 0.3
TRIM39-205ENST00000396551 CEP350Q5VT06 3117 aa16.94■□□□□ 0.3
TRIM39-205ENST00000396551 M0QZQ0 153 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms