RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 TFAP2DQ7Z6R9 452 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 C14orf80Q86SX3 495 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 ZNF354CQ86Y25 554 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 LRRC49Q8IUZ0 686 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 MICALL1Q8N3F8 863 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 CPXM2Q8N436 756 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 ALLCQ8N6M5 410 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 CELF5Q8N6W0 485 aaKnown RBP15.84■□□□□ 0.13
VAMP1-202ENST00000396308 BBOF1Q8ND07 529 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 ZSCAN18Q8TBC5 510 aaPredicted RBP15.84■□□□□ 0.13
VAMP1-202ENST00000396308 TMEM121Q9BTD3 319 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 ADAM7Q9H2U9 754 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 TTYH1Q9H313 450 aaPredicted RBP15.84■□□□□ 0.13
VAMP1-202ENST00000396308 PCDH9Q9HC56 1237 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 FAM114A2Q9NRY5 505 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 ETNK2Q9NVF9 386 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 HAUS2Q9NVX0 235 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 GDE1Q9NZC3 331 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 MPP6Q9NZW5 540 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 STOML2Q9UJZ1 356 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 MTCH2Q9Y6C9 303 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 MYO9BQ13459 2157 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 DENND4AQ7Z401 1863 aa15.84■□□□□ 0.13
VAMP1-202ENST00000396308 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.83■□□□□ 0.12
VAMP1-202ENST00000396308 GOLGA6L7A0A1B0GV03 622 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 BCLAF3A2AJT9 711 aaKnown RBP15.83■□□□□ 0.12
VAMP1-202ENST00000396308 DRGXA6NNA5 263 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 DFFAO00273 331 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 SOX1O00570 391 aaPredicted RBP15.83■□□□□ 0.12
VAMP1-202ENST00000396308 KCNN4O15554 427 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 NEBLO76041 1014 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 KRT14P02533 472 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 KLKB1P03952 638 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 POU3F3P20264 500 aaPredicted RBP15.83■□□□□ 0.12
VAMP1-202ENST00000396308 WEE1P30291 646 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 OR1E1P30953 314 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 SLC6A4P31645 630 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 SLC7A5Q01650 507 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 ZNF33AQ06730 810 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 GALNT2Q10471 571 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 AP1B1Q10567 949 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 USP4Q13107 963 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 CALCOCO2Q13137 446 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 ZNF177Q13360 481 aaPredicted RBP15.83■□□□□ 0.12
VAMP1-202ENST00000396308 CUL1Q13616 776 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 RFWD3Q6PCD5 774 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 ZNF683Q8IZ20 524 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 KIAA1958Q8N8K9 716 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 TDRD5Q8NAT2 981 aaKnown RBP15.83■□□□□ 0.12
VAMP1-202ENST00000396308 ITFG1Q8TB96 612 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 NSMCE1Q8WV22 266 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 USP13Q92995 863 aaPredicted RBP15.83■□□□□ 0.12
VAMP1-202ENST00000396308 LRRC45Q96CN5 670 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 HDAC11Q96DB2 347 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 OTUB2Q96DC9 234 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 OLFM3Q96PB7 478 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 ERP44Q9BS26 406 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 TRIM51Q9BSJ1 452 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 NEU3Q9UQ49 428 aa15.83■□□□□ 0.12
VAMP1-202ENST00000396308 TSPAN3O60637 253 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 RAMP2O60895 175 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 MAP3K6O95382 1288 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 PTGIRP43119 386 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 YBEYP58557 167 aaPredicted RBP15.82■□□□□ 0.12
VAMP1-202ENST00000396308 HLTFQ14527 1009 aaKnown RBP eCLIP15.82■□□□□ 0.12
VAMP1-202ENST00000396308 ANO4Q32M45 955 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 PARP15Q460N3 678 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 C5orf22Q49AR2 442 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 MPPE1Q53F39 396 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 SYCE2Q6PIF2 218 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 NLRP14Q86W24 1093 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 ARID3BQ8IVW6 561 aaPredicted RBP15.82■□□□□ 0.12
VAMP1-202ENST00000396308 NPAS3Q8IXF0 933 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 FAM217AQ8IXS0 508 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 UMODL1-AS1Q8N2C9 162 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 ZNF557Q8N988 423 aaPredicted RBP15.82■□□□□ 0.12
VAMP1-202ENST00000396308 IGSF8Q969P0 613 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 E2F7Q96AV8 911 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 PABPC5Q96DU9 382 aaKnown RBP15.82■□□□□ 0.12
VAMP1-202ENST00000396308 TMA16Q96EY4 203 aaKnown RBP15.82■□□□□ 0.12
VAMP1-202ENST00000396308 CELF6Q96J87 481 aaKnown RBP15.82■□□□□ 0.12
VAMP1-202ENST00000396308 NECTIN4Q96NY8 510 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 FAM129AQ9BZQ8 928 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 SMG9Q9H0W8 520 aaKnown RBP15.82■□□□□ 0.12
VAMP1-202ENST00000396308 ANKZF1Q9H8Y5 726 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 EPB41L5Q9HCM4 733 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 MFHAS1Q9Y4C4 1052 aa15.82■□□□□ 0.12
VAMP1-202ENST00000396308 ZFP37Q9Y6Q3 630 aaPredicted RBP15.82■□□□□ 0.12
VAMP1-202ENST00000396308 NYNRINQ9P2P1 1898 aaKnown RBP15.82■□□□□ 0.12
VAMP1-202ENST00000396308 TBL1XO60907 577 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 PRAMEF12O95522 483 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 RHOCP08134 193 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 ADCY8P40145 1251 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 GARSP41250 739 aaKnown RBP15.81■□□□□ 0.12
VAMP1-202ENST00000396308 OXCT1P55809 520 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 PPIDQ08752 370 aaKnown RBP15.81■□□□□ 0.12
VAMP1-202ENST00000396308 CDH18Q13634 790 aa15.81■□□□□ 0.12
VAMP1-202ENST00000396308 POLD3Q15054 466 aaPredicted RBP15.81■□□□□ 0.12
VAMP1-202ENST00000396308 PRKD1Q15139 912 aaPredicted RBP15.81■□□□□ 0.12
VAMP1-202ENST00000396308 ZNF77Q15935 545 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms