RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 hCG_2014768A0A024R1R8 64 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 FAM86B1E9PN63 330 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 NDUFB5O43674 189 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 TNFAIP8O95379 198 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 FAM86B2P0C5J1 330 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 FGFR1P11362 822 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 IL2P60568 153 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 STX4Q12846 297 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 ACVR2BQ13705 512 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 FRG1Q14331 258 aaKnown RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 SHROOM1Q2M3G4 852 aaPredicted RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 FAM126BQ8IXS8 530 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 DEFB107AQ8IZN7 70 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 SETD9Q8NE22 299 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 MOSPD2Q8NHP6 518 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 ACTRT2Q8TDY3 377 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 ATXN2LQ8WWM7 1075 aaKnown RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 C18orf25Q96B23 403 aaPredicted RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 APOPT1Q96IL0 206 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 C2orf49Q9BVC5 232 aaPredicted RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 A1CFQ9NQ94 594 aaKnown RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 IL17RBQ9NRM6 502 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 ADAMTS13Q76LX8 1427 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF862O60290 1169 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 KLHL41O60662 606 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 POMCP01189 267 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 MAPK8P45983 427 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 FASTKQ14296 549 aaKnown RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 LYPLAL1Q5VWZ2 237 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 C16orf62Q7Z3J2 963 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 KATNAL2Q8IYT4 538 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 QRFPRQ96P65 431 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 ACOX2Q99424 681 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 FAM126AQ9BYI3 521 aaPredicted RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 SHCBP1LQ9BZQ2 653 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 CAPN10Q9HC96 672 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 UBP1Q9NZI7 540 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 CCDC167Q9P0B6 97 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 MORF4L1Q9UBU8 362 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 CHADO15335 359 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 CLTBP09497 229 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 SERPINA4P29622 427 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 HNRNPH1P31943 449 aaKnown RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 TMEM119Q4V9L6 283 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 ANKRD49Q8WVL7 239 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 DLG3Q92796 817 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 PORCNQ9H237 461 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 CXorf56Q9H5V9 222 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 TRPC4Q9UBN4 977 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 KLHL3Q9UH77 587 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 DNPEPQ9ULA0 475 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 SIGLEC16A6NMB1 481 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 MTA2O94776 668 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 WEE1P30291 646 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 MSLNQ13421 630 aaPredicted RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 MFSD10Q14728 455 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 SAMD4BQ5PRF9 694 aaKnown RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 PDZK1Q5T2W1 519 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 TFAP2DQ7Z6R9 452 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 SYTL1Q8IYJ3 562 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 METTL6Q8TCB7 284 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 TRPC4APQ8TEL6 797 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 PPP1R14AQ96A00 147 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 BTBD10Q9BSF8 475 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 LRRC4BQ9NT99 713 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 SPG21Q9NZD8 308 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 CROTQ9UKG9 612 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 INVSQ9Y283 1065 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 TPRKBQ9Y3C4 175 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 ADGRB2O60241 1585 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 DDTLA6NHG4 134 aaPredicted RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 TRIM13O60858 407 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 GHRP10912 638 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 SLC2A4P14672 509 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 MLH1P40692 756 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 MMP13P45452 471 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 VAC14Q08AM6 782 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 PEX6Q13608 980 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 TBCELQ5QJ74 424 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 MAP4K3Q8IVH8 894 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 TCP10LQ8TDR4 215 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 AHCYL2Q96HN2 611 aaKnown RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 C9orf16Q9BUW7 83 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 MEGF6O75095 1541 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 MLYCDO95822 493 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 DGKAP23743 735 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 KLRK1P26718 216 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 PBLDP30039 288 aaPredicted RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 ACOX1Q15067 660 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 FSCN1Q16658 493 aaKnown RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 PARP6Q2NL67 630 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 ARMC12Q5T9G4 340 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 IRAK1BP1Q5VVH5 260 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 TMEM26Q6ZUK4 368 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 HDDC2Q7Z4H3 204 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 MILR1Q7Z6M3 343 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 KRT73Q86Y46 540 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 PSTKQ8IV42 348 aaKnown RBP5.56□□□□□ -1.52
VPS13C-204ENST00000395898 BRSK2Q8IWQ3 736 aa5.56□□□□□ -1.52
VPS13C-204ENST00000395898 EDEM1Q92611 657 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms