RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 UNC93B1Q9H1C4 597 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 DNAJC17Q9NVM6 304 aaKnown RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 INSL6Q9Y581 213 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF844Q08AG5 666 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SEZ6Q53EL9 994 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 TRPM8Q7Z2W7 1104 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 DEFB106AQ8N104 65 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 OVCA2Q8WZ82 227 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 KAT5Q92993 513 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ART4Q93070 314 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF669Q96BR6 464 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF668Q96K58 619 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SH3GL1Q99961 368 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 PRDM5Q9NQX1 630 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 LATS2Q9NRM7 1088 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 VTI1BQ9UEU0 232 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 DNAH12Q6ZR08 3092 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 H0Y626 953 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 PIRO00625 290 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 B4GALT5O43286 388 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 VPS26AO75436 327 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 KATNA1O75449 491 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF7P17097 686 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SERPINA4P29622 427 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ARPP19P56211 112 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 BEX3Q00994 111 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 MSLNQ13421 630 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ANKRD20A8PQ5CZ79 823 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 GRTP1Q5TC63 336 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 MAGEC3Q8TD91 643 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 DDX23Q9BUQ8 820 aaKnown RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SMYD2Q9NRG4 433 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 THAP1Q9NVV9 213 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 AP3M1Q9Y2T2 418 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ANGPTL3Q9Y5C1 460 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 PRRC2CQ9Y520 2896 aaKnown RBP3.46□□□□□ -1.85
VPS13C-203ENST00000395896 ERCC2P18074 760 aa3.46□□□□□ -1.85
VPS13C-203ENST00000395896 SLC26A3P40879 764 aa3.46□□□□□ -1.85
VPS13C-203ENST00000395896 ASPAP45381 313 aa3.46□□□□□ -1.85
VPS13C-203ENST00000395896 EIF2B5Q13144 721 aaKnown RBP3.46□□□□□ -1.85
VPS13C-203ENST00000395896 LLGL1Q15334 1064 aa3.46□□□□□ -1.85
VPS13C-203ENST00000395896 ZC3H12AQ5D1E8 599 aaKnown RBP3.46□□□□□ -1.85
VPS13C-203ENST00000395896 SDE2Q6IQ49 451 aa3.46□□□□□ -1.85
VPS13C-203ENST00000395896 NLRP14Q86W24 1093 aa3.46□□□□□ -1.85
VPS13C-203ENST00000395896 PIWIL2Q8TC59 973 aaKnown RBP3.46□□□□□ -1.85
VPS13C-203ENST00000395896 DCUN1D1Q96GG9 259 aa3.46□□□□□ -1.85
VPS13C-203ENST00000395896 PCED1BQ96HM7 432 aa3.46□□□□□ -1.85
VPS13C-203ENST00000395896 TMEM175Q9BSA9 504 aa3.46□□□□□ -1.85
VPS13C-203ENST00000395896 OSBPL2Q9H1P3 480 aa3.46□□□□□ -1.85
VPS13C-203ENST00000395896 ASAH2Q9NR71 780 aa3.46□□□□□ -1.85
VPS13C-203ENST00000395896 CAPN7Q9Y6W3 813 aa3.46□□□□□ -1.85
VPS13C-203ENST00000395896 ATMINO43313 823 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 MAP3K7CLP57077 242 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SESN2P58004 480 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 RBBP5Q15291 538 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 WSCD1Q658N2 575 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 DENND1BQ6P3S1 775 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SEMA4DQ92854 862 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 COPS5Q92905 334 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 CINPQ9BW66 212 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 YY1AP1Q9H869 796 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 C20orf96Q9NUD7 363 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 ARHGEF38Q9NXL2 777 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 TDRD6O60522 2096 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 INTS1Q8N201 2190 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 CASTOR2A6NHX0 329 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 TPBGLP0DKB5 382 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 CCNB1P14635 433 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 CCNCP24863 283 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 DDX6P26196 483 aaKnown RBP eCLIP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SKP1P63208 163 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 TRIP13Q15645 432 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 FASTKD1Q53R41 847 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 METTL21CQ5VZV1 264 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 RYBPQ8N488 228 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SLC35B2Q8TB61 432 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 LNX1Q8TBB1 728 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 CERS2Q96G23 380 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 ZNF599Q96NL3 588 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 MAGEH1Q9H213 219 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SUDS3Q9H7L9 328 aaPredicted RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 RIC8BQ9NVN3 520 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 GNEQ9Y223 722 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 TLR6Q9Y2C9 796 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 RNF103O00237 685 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 BAIAP3O94812 1187 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 MPOP05164 745 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 YY1P25490 414 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 FLT3P36888 993 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 DPYSL3Q14195 570 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 PCID2Q5JVF3 399 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 TNIP2Q8NFZ5 429 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 XPO6Q96QU8 1125 aaKnown RBP3.46□□□□□ -1.86
VPS13C-203ENST00000395896 CYP4F11Q9HBI6 524 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 PTPRHQ9HD43 1115 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 SPG21Q9NZD8 308 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 THEGQ9P2T0 379 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 CREBBPQ92793 2442 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 BIRC5O15392 142 aa3.46□□□□□ -1.86
VPS13C-203ENST00000395896 HNRNPRO43390 633 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms