RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 CASC3O15234 703 aaKnown RBP14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 RNASEH1O60930 286 aaKnown RBP14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 WT1P19544 449 aaPredicted RBP14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 C5AR1P21730 350 aa14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 NDST1P52848 882 aa14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 KCNMA1Q12791 1236 aa14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 SKIDA1Q1XH10 827 aa14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 C8orf34Q49A92 452 aa14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 PRPF39Q86UA1 669 aaKnown RBP14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 TRIM69Q86WT6 500 aa14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 HTR3CQ8WXA8 447 aa14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 ELMO3Q96BJ8 720 aa14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 ABCG4Q9H172 646 aa14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 KDM4CQ9H3R0 1056 aa14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 LIMCH1Q9UPQ0 1083 aa14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 CA5BQ9Y2D0 317 aa14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 PCDHGA4Q9Y5G9 962 aa14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 SCN8AQ9UQD0 1980 aa14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 SLC12A8A0AV02 714 aa14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 PLRG1O43660 514 aaKnown RBP14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 TCEA3O75764 348 aa14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 POLR2EP19388 210 aaKnown RBP14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 ADORA2BP29275 332 aa14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 CASRP41180 1078 aa14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 AFMP43652 599 aa14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 METAP1P53582 386 aa14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 TRPC3Q13507 836 aa14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 MPP7Q5T2T1 576 aa14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 RBM44Q6ZP01 1051 aaKnown RBP14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 UNC93AQ86WB7 457 aa14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 FAM184AQ8NB25 1140 aa14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 PLEKHO2Q8TD55 490 aa14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 JAKMIP2Q96AA8 810 aa14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 TMA16Q96EY4 203 aaKnown RBP14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 TWNKQ96RR1 684 aa14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 STK17AQ9UEE5 414 aa14.21□□□□□ -0.13
VCPKMT-201ENST00000395859 TBC1D3DA0A087WVF3 549 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 TBC1D3IA0A087WXS9 549 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 TBC1D3EA0A087X179 549 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 TBC1D3KA0A087X1G2 549 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 CCDC187A0A096LP49 1063 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 EME2A4GXA9 379 aaPredicted RBP14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 TBC1D3FA6NER0 549 aaPredicted RBP14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 TTC34A8MYJ7 566 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 TBC1D3LB9A6J9 549 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 PRAMEF26H0Y7S4 382 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 TGFB1I1O43294 461 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 VNN1O95497 513 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 LATS1O95835 1130 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 ADH1BP00325 375 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 TBC1D3HP0C7X1 549 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 POU3F2P20265 443 aaPredicted RBP14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 SLC5A2P31639 672 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 PSMD8P48556 350 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 MORC3Q14149 939 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 STAT4Q14765 748 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 HS1BP3Q53T59 392 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 ZNF667Q5HYK9 610 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 ADGRF1Q5T601 910 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 TBC1D3GQ6DHY5 549 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 TBC1D3CQ6IPX1 549 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 GUSBP11Q6P575 273 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 SCARA5Q6ZMJ2 495 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 BHLHA9Q7RTU4 235 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 TBC1D3Q8IZP1 549 aaPredicted RBP14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 PTPRN2Q92932 1015 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 ARRDC3Q96B67 414 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 CCDC127Q96BQ5 260 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 IFT43Q96FT9 208 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 KLHDC7BQ96G42 594 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 DUSP23Q9BVJ7 150 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 ADNPQ9H2P0 1102 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 GPR27Q9NS67 375 aa14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 PLEKHB1Q9UF11 243 aaPredicted RBP14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 SETD2Q9BYW2 2564 aaPredicted RBP14.2□□□□□ -0.14
VCPKMT-201ENST00000395859 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 RNGTTO60942 597 aaKnown RBP14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 ASLP04424 464 aa14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 ALPPL2P10696 532 aa14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 MZF1P28698 734 aaPredicted RBP14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 MAT2AP31153 395 aaKnown RBP14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 ANP32AP39687 249 aaKnown RBP14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 CSKP41240 450 aa14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 CLDN10P78369 228 aa14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 ZNF177Q13360 481 aaPredicted RBP14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 ZNF699Q32M78 642 aa14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 PTRH1Q86Y79 214 aaKnown RBP14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 SLC22A18ASQ8N1D0 253 aa14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 RDH13Q8NBN7 331 aa14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 TPCN2Q8NHX9 752 aa14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 CYFIP2Q96F07 1278 aa14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 LIN37Q96GY3 246 aaPredicted RBP14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 EPSTI1Q96J88 318 aa14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 IRX2Q9BZI1 471 aaPredicted RBP14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 ZFC3H1O60293 1989 aaKnown RBP14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 LRRK1Q38SD2 2015 aa14.19□□□□□ -0.14
VCPKMT-201ENST00000395859 EDDM13A0A1B0GTR0 161 aa14.18□□□□□ -0.14
VCPKMT-201ENST00000395859 RIOK3O14730 519 aaKnown RBP14.18□□□□□ -0.14
VCPKMT-201ENST00000395859 SLC7A4O43246 635 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms