RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 E2F7Q96AV8 911 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 NECTIN4Q96NY8 510 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 ZNF446Q9NWS9 450 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 SNX10Q9Y5X0 201 aa14.07□□□□□ -0.16
VAPB-202ENST00000395802 ZFP37Q9Y6Q3 630 aaPredicted RBP14.07□□□□□ -0.16
VAPB-202ENST00000395802 A0A1B0GVM2 712 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 TCAF2A6NFQ2 919 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 TTI1O43156 1089 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 IGFBP4P22692 258 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 OR1E1P30953 314 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 ETFBP38117 255 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 GGCXP38435 758 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 MTHFRP42898 656 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 KCNJ1P48048 391 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 YBEYP58557 167 aaPredicted RBP14.06□□□□□ -0.16
VAPB-202ENST00000395802 CTC1Q2NKJ3 1217 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 SLC45A4Q5BKX6 768 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 MPP7Q5T2T1 576 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 GPR153Q6NV75 609 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 SYCE2Q6PIF2 218 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 C14orf80Q86SX3 495 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 ARID3BQ8IVW6 561 aaPredicted RBP14.06□□□□□ -0.16
VAPB-202ENST00000395802 FAM217AQ8IXS0 508 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 UMODL1-AS1Q8N2C9 162 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 HJURPQ8NCD3 748 aaPredicted RBP14.06□□□□□ -0.16
VAPB-202ENST00000395802 BBOF1Q8ND07 529 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 CCNYQ8ND76 341 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 ZSCAN18Q8TBC5 510 aaPredicted RBP14.06□□□□□ -0.16
VAPB-202ENST00000395802 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.06□□□□□ -0.165e-8■■■■■ 65.3
VAPB-202ENST00000395802 PABPC5Q96DU9 382 aaKnown RBP14.06□□□□□ -0.16
VAPB-202ENST00000395802 OLFM3Q96PB7 478 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 ERP44Q9BS26 406 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 TMEM121Q9BTD3 319 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 ETNK2Q9NVF9 386 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 CLDND1Q9NY35 253 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 NEU3Q9UQ49 428 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.06□□□□□ -0.16
VAPB-202ENST00000395802 MFSD11O43934 449 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 MYBL2P10244 700 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 CEBPBP17676 345 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 TNFRSF8P28908 595 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 DRG2P55039 364 aaKnown RBP14.06□□□□□ -0.16
VAPB-202ENST00000395802 OXCT1P55809 520 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 GALNT2Q10471 571 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 ZNF177Q13360 481 aaPredicted RBP14.06□□□□□ -0.16
VAPB-202ENST00000395802 CUL1Q13616 776 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 PARP15Q460N3 678 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 TIGD7Q6NT04 549 aaPredicted RBP14.06□□□□□ -0.16
VAPB-202ENST00000395802 NPNTQ6UXI9 565 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 SETD3Q86TU7 594 aaPredicted RBP14.06□□□□□ -0.16
VAPB-202ENST00000395802 NLRP14Q86W24 1093 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 EIF1ADQ8N9N8 165 aaKnown RBP14.06□□□□□ -0.16
VAPB-202ENST00000395802 ITFG1Q8TB96 612 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 ADAMTS19Q8TE59 1207 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 USP13Q92995 863 aaPredicted RBP14.06□□□□□ -0.16
VAPB-202ENST00000395802 HDAC11Q96DB2 347 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 TMA16Q96EY4 203 aaKnown RBP14.06□□□□□ -0.16
VAPB-202ENST00000395802 FAM118BQ9BPY3 351 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 FAM129AQ9BZQ8 928 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 ARFGAP3Q9NP61 516 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 FAM114A2Q9NRY5 505 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 OBP2AQ9NY56 170 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 MPP6Q9NZW5 540 aa14.06□□□□□ -0.16
VAPB-202ENST00000395802 ZSCAN5CA6NGD5 496 aaPredicted RBP14.05□□□□□ -0.16
VAPB-202ENST00000395802 ARHGAP42A6NI28 874 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 BHMG1C9JSJ3 638 aaPredicted RBP14.05□□□□□ -0.16
VAPB-202ENST00000395802 LINC01565O15544 149 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 GREM1O60565 184 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 RAMP2O60895 175 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 ERLIN1O75477 346 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 SEC31AO94979 1220 aaKnown RBP14.05□□□□□ -0.16
VAPB-202ENST00000395802 SLC6A4P31645 630 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 GARSP41250 739 aaKnown RBP14.05□□□□□ -0.16
VAPB-202ENST00000395802 PTGIRP43119 386 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 ZXDBP98169 803 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 GUCY2DQ02846 1103 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 AP1B1Q10567 949 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 PTK6Q13882 451 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 P3H1Q32P28 736 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 MPPE1Q53F39 396 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 BEND6Q5SZJ8 279 aaPredicted RBP14.05□□□□□ -0.16
VAPB-202ENST00000395802 ZNF783Q6ZMS7 281 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 EP400NLQ6ZTU2 488 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 ATPAF2Q8N5M1 289 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 TTC16Q8NEE8 873 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 FGF13Q92913 245 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 SMARCD2Q92925 531 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 IGSF8Q969P0 613 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 LRRC45Q96CN5 670 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 QKIQ96PU8 341 aaKnown RBP eCLIP14.05□□□□□ -0.163e-14■■■■■ 54.8
VAPB-202ENST00000395802 VAT1Q99536 393 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 HINFPQ9BQA5 517 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 PCDH9Q9HC56 1237 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 GDF3Q9NR23 364 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 HAUS2Q9NVX0 235 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 ASIC3Q9UHC3 531 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 TRIOBPQ9H2D6 2365 aa14.05□□□□□ -0.16
VAPB-202ENST00000395802 GOLGA6L7A0A1B0GV03 622 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 KCNN4O15554 427 aa14.04□□□□□ -0.16
VAPB-202ENST00000395802 IFNB1P01574 187 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms