RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 FAM71AQ8IYT1 594 aa18.63■□□□□ 0.57
CXCL12-204ENST00000395793 CCAR2Q8N163 923 aaKnown RBP18.63■□□□□ 0.57
CXCL12-204ENST00000395793 ATP6V0D2Q8N8Y2 350 aa18.63■□□□□ 0.57
CXCL12-204ENST00000395793 OR52K2Q8NGK3 314 aa18.63■□□□□ 0.57
CXCL12-204ENST00000395793 GATA6Q92908 595 aa18.63■□□□□ 0.57
CXCL12-204ENST00000395793 BIRC7Q96CA5 298 aa18.63■□□□□ 0.57
CXCL12-204ENST00000395793 BTBD1Q9H0C5 482 aa18.63■□□□□ 0.57
CXCL12-204ENST00000395793 NDST4Q9H3R1 872 aa18.63■□□□□ 0.57
CXCL12-204ENST00000395793 KIAA1522Q9P206 1035 aaPredicted RBP18.63■□□□□ 0.57
CXCL12-204ENST00000395793 KLK13Q9UKR3 277 aa18.63■□□□□ 0.57
CXCL12-204ENST00000395793 CABIN1Q9Y6J0 2220 aa18.62■□□□□ 0.57
CXCL12-204ENST00000395793 F5H5T6 163 aa18.62■□□□□ 0.57
CXCL12-204ENST00000395793 HSF2BPO75031 334 aa18.62■□□□□ 0.57
CXCL12-204ENST00000395793 DAB1O75553 588 aa18.62■□□□□ 0.57
CXCL12-204ENST00000395793 IGHV4-34P06331 123 aa18.62■□□□□ 0.57
CXCL12-204ENST00000395793 SRPRAP08240 638 aaKnown RBP18.62■□□□□ 0.57
CXCL12-204ENST00000395793 MZF1P28698 734 aaPredicted RBP18.62■□□□□ 0.57
CXCL12-204ENST00000395793 CSNK1EP49674 416 aaKnown RBP18.62■□□□□ 0.57
CXCL12-204ENST00000395793 CDK17Q00537 523 aa18.62■□□□□ 0.57
CXCL12-204ENST00000395793 CENPCQ03188 943 aa18.62■□□□□ 0.57
CXCL12-204ENST00000395793 PTK2Q05397 1052 aa18.62■□□□□ 0.57
CXCL12-204ENST00000395793 TTC31Q49AM3 519 aaPredicted RBP18.62■□□□□ 0.57
CXCL12-204ENST00000395793 VWA3BQ502W6 1294 aa18.62■□□□□ 0.57
CXCL12-204ENST00000395793 OR6B2Q6IFH4 312 aa18.62■□□□□ 0.57
CXCL12-204ENST00000395793 CXorf57Q6NSI4 855 aaKnown RBP18.62■□□□□ 0.57
CXCL12-204ENST00000395793 C11orf57Q6ZUT1 292 aaPredicted RBP18.62■□□□□ 0.57
CXCL12-204ENST00000395793 KDM1BQ8NB78 822 aa18.62■□□□□ 0.57
CXCL12-204ENST00000395793 IGSF8Q969P0 613 aa18.62■□□□□ 0.57
CXCL12-204ENST00000395793 RPL10LQ96L21 214 aaKnown RBP18.62■□□□□ 0.57
CXCL12-204ENST00000395793 FAM129BQ96TA1 746 aa18.62■□□□□ 0.57
CXCL12-204ENST00000395793 GAREM1Q9H706 876 aa18.62■□□□□ 0.57
CXCL12-204ENST00000395793 TM9SF3Q9HD45 589 aa18.62■□□□□ 0.57
CXCL12-204ENST00000395793 FHOD1Q9Y613 1164 aa18.62■□□□□ 0.57
CXCL12-204ENST00000395793 FAM170AA1A519 330 aa18.61■□□□□ 0.57
CXCL12-204ENST00000395793 C10orf142B7Z368 130 aa18.61■□□□□ 0.57
CXCL12-204ENST00000395793 MID1O15344 667 aa18.61■□□□□ 0.57
CXCL12-204ENST00000395793 CBFA2T3O75081 653 aa18.61■□□□□ 0.57
CXCL12-204ENST00000395793 FSBPO95073 299 aa18.61■□□□□ 0.57
CXCL12-204ENST00000395793 PRKCSHP14314 528 aaPredicted RBP18.61■□□□□ 0.57
CXCL12-204ENST00000395793 VAV1P15498 845 aa18.61■□□□□ 0.57
CXCL12-204ENST00000395793 PDGFRAP16234 1089 aa18.61■□□□□ 0.57
CXCL12-204ENST00000395793 TFE3P19532 575 aaPredicted RBP18.61■□□□□ 0.57
CXCL12-204ENST00000395793 ECT2LQ008S8 904 aa18.61■□□□□ 0.57
CXCL12-204ENST00000395793 CST6Q15828 149 aa18.61■□□□□ 0.57
CXCL12-204ENST00000395793 HLA-BQ31612 363 aa18.61■□□□□ 0.57
CXCL12-204ENST00000395793 EFHC1Q5JVL4 640 aa18.61■□□□□ 0.57
CXCL12-204ENST00000395793 FBXL22Q6P050 247 aa18.61■□□□□ 0.57
CXCL12-204ENST00000395793 SLC26A9Q7LBE3 791 aa18.61■□□□□ 0.57
CXCL12-204ENST00000395793 MMAAQ8IVH4 418 aaKnown RBP18.61■□□□□ 0.57
CXCL12-204ENST00000395793 PTPRN2Q92932 1015 aa18.61■□□□□ 0.57
CXCL12-204ENST00000395793 TUBGCP2Q9BSJ2 902 aa18.61■□□□□ 0.57
CXCL12-204ENST00000395793 SGK2Q9HBY8 427 aa18.61■□□□□ 0.57
CXCL12-204ENST00000395793 ANLNQ9NQW6 1124 aa18.61■□□□□ 0.57
CXCL12-204ENST00000395793 SAMSN1Q9NSI8 373 aaKnown RBP18.61■□□□□ 0.57
CXCL12-204ENST00000395793 FBXL12Q9NXK8 326 aa18.61■□□□□ 0.57
CXCL12-204ENST00000395793 A0A1B0GVM2 712 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 A0A1W2PP55 124 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 TCAF2A6NFQ2 919 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 I6L893 689 aaPredicted RBP18.6■□□□□ 0.57
CXCL12-204ENST00000395793 CCR1P32246 355 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 MATKP42679 507 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 SLC6A3Q01959 620 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 NME3Q13232 169 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 DRAP1Q14919 205 aaPredicted RBP18.6■□□□□ 0.57
CXCL12-204ENST00000395793 TRIP6Q15654 476 aaKnown RBP18.6■□□□□ 0.57
CXCL12-204ENST00000395793 KIF19Q2TAC6 998 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 KCNT1Q5JUK3 1230 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 USP30Q70CQ3 517 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 C14orf80Q86SX3 495 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 CCDC117Q8IWD4 279 aaPredicted RBP18.6■□□□□ 0.57
CXCL12-204ENST00000395793 FAM114A1Q8IWE2 563 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 STK40Q8N2I9 435 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 AADATQ8N5Z0 425 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 ZNF397Q8NF99 534 aaPredicted RBP18.6■□□□□ 0.57
CXCL12-204ENST00000395793 ALG14Q96F25 216 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 NUP62CLQ9H1M0 184 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 NEUROG2Q9H2A3 272 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 EBF2Q9HAK2 575 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 SNX11Q9Y5W9 270 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 HS3ST4Q9Y661 456 aa18.6■□□□□ 0.57
CXCL12-204ENST00000395793 PTPRBP23467 1997 aa18.59■□□□□ 0.57
CXCL12-204ENST00000395793 PLXNB3Q9ULL4 1909 aa18.59■□□□□ 0.57
CXCL12-204ENST00000395793 EDDM13A0A1B0GTR0 161 aa18.59■□□□□ 0.57
CXCL12-204ENST00000395793 TARSL2A2RTX5 802 aaKnown RBP18.59■□□□□ 0.57
CXCL12-204ENST00000395793 MOCS3O95396 460 aa18.59■□□□□ 0.57
CXCL12-204ENST00000395793 CER1O95813 267 aa18.59■□□□□ 0.57
CXCL12-204ENST00000395793 ZNF883P0CG24 379 aa18.59■□□□□ 0.57
CXCL12-204ENST00000395793 SLC2A3P11169 496 aa18.59■□□□□ 0.57
CXCL12-204ENST00000395793 ABCB4P21439 1286 aa18.59■□□□□ 0.57
CXCL12-204ENST00000395793 CD27P26842 260 aa18.59■□□□□ 0.57
CXCL12-204ENST00000395793 ERCC5P28715 1186 aaPredicted RBP18.59■□□□□ 0.57
CXCL12-204ENST00000395793 CDH5P33151 784 aaPredicted RBP18.59■□□□□ 0.57
CXCL12-204ENST00000395793 KRT9P35527 623 aa18.59■□□□□ 0.57
CXCL12-204ENST00000395793 PSMD8P48556 350 aa18.59■□□□□ 0.57
CXCL12-204ENST00000395793 AFF3P51826 1226 aaKnown RBP18.59■□□□□ 0.57
CXCL12-204ENST00000395793 GALCP54803 685 aa18.59■□□□□ 0.57
CXCL12-204ENST00000395793 AUHQ13825 339 aaKnown RBP18.59■□□□□ 0.57
CXCL12-204ENST00000395793 KIAA0895LQ68EN5 471 aa18.59■□□□□ 0.57
CXCL12-204ENST00000395793 SMYD5Q6GMV2 418 aa18.59■□□□□ 0.57
CXCL12-204ENST00000395793 RAB44Q7Z6P3 723 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms