RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 SYNJ2BP-COX16A0A087WUM0 186 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 METTL12A8MUP2 240 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 F8VZ95 297 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 RNF103O00237 685 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 ARHGAP33O14559 1287 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 CAPN9O14815 690 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 SYNCRIPO60506 623 aaKnown RBP9.15□□□□□ -0.94
ATG4A-205ENST00000394892 HSF2BPO75031 334 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 DAB1O75553 588 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 CNTN5O94779 1100 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 MMEP08473 750 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 ZNF18P17022 549 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 POLR2EP19388 210 aaKnown RBP9.15□□□□□ -0.94
ATG4A-205ENST00000394892 FLT3P36888 993 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 JAM2P57087 298 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 CDK17Q00537 523 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 AUHQ13825 339 aaKnown RBP9.15□□□□□ -0.94
ATG4A-205ENST00000394892 RAPGEF1Q13905 1077 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 ARID5BQ14865 1188 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 TPD52L1Q16890 204 aaPredicted RBP9.15□□□□□ -0.94
ATG4A-205ENST00000394892 DUOXA1Q1HG43 343 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 HNRNPA1L2Q32P51 320 aaKnown RBP9.15□□□□□ -0.94
ATG4A-205ENST00000394892 PLEKHG6Q3KR16 790 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 C5orf22Q49AR2 442 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 KCNT1Q5JUK3 1230 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 SMYD5Q6GMV2 418 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 CHSY1Q86X52 802 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 CCAR2Q8N163 923 aaKnown RBP9.15□□□□□ -0.94
ATG4A-205ENST00000394892 EPS8L1Q8TE68 723 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 FRS2Q8WU20 508 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 PRCCQ92733 491 aaPredicted RBP9.15□□□□□ -0.94
ATG4A-205ENST00000394892 GOLGA1Q92805 767 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 GATA6Q92908 595 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 BTN2A3PQ96KV6 586 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 RPL10LQ96L21 214 aaKnown RBP9.15□□□□□ -0.94
ATG4A-205ENST00000394892 FAM81BQ96LP2 452 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 GTPBP2Q9BX10 602 aaKnown RBP9.15□□□□□ -0.94
ATG4A-205ENST00000394892 STK33Q9BYT3 514 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 MAGEB5Q9BZ81 275 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 RSPH9Q9H1X1 276 aaPredicted RBP9.15□□□□□ -0.94
ATG4A-205ENST00000394892 IL21RQ9HBE5 538 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 COX16Q9P0S2 106 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 TMEM59LQ9UK28 342 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 ERVW-1Q9UQF0 538 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 MSRB2Q9Y3D2 182 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 HS3ST4Q9Y661 456 aa9.15□□□□□ -0.94
ATG4A-205ENST00000394892 MYH10P35580 1976 aa9.15□□□□□ -0.95
ATG4A-205ENST00000394892 CACNA1EQ15878 2313 aa9.15□□□□□ -0.95
ATG4A-205ENST00000394892 FRYQ5TBA9 3013 aa9.15□□□□□ -0.95
ATG4A-205ENST00000394892 ITIH6Q6UXX5 1313 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 PCDH15Q96QU1 1955 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 UPK3BL1B0FP48 263 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 UPK3BL2E5RIL1 263 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 HYAL3O43820 417 aaPredicted RBP9.14□□□□□ -0.95
ATG4A-205ENST00000394892 OPHN1O60890 802 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 PAGE1O75459 146 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 GJB6O95452 261 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 APOEP02649 317 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 PDGFRAP16234 1089 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 EEF1GP26641 437 aaKnown RBP9.14□□□□□ -0.95
ATG4A-205ENST00000394892 NOS2P35228 1153 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 KRT9P35527 623 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 MATKP42679 507 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 CXCR3P49682 368 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 NOMO3P69849 1222 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 FMO1Q01740 532 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 PTP4A2Q12974 167 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 GRIK2Q13002 908 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 NME3Q13232 169 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 ALFQ53S48 1182 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 CT47A1Q5JQC4 288 aaPredicted RBP9.14□□□□□ -0.95
ATG4A-205ENST00000394892 EFHC1Q5JVL4 640 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 DCAF12L1Q5VU92 463 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 LAYNQ6UX15 382 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 PHLDB2Q86SQ0 1253 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 FAM114A1Q8IWE2 563 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 DHX40Q8IX18 779 aaKnown RBP9.14□□□□□ -0.95
ATG4A-205ENST00000394892 ZCCHC9Q8N567 271 aaKnown RBP9.14□□□□□ -0.95
ATG4A-205ENST00000394892 MINDY1Q8N5J2 469 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 CADM4Q8NFZ8 388 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 CPA5Q8WXQ8 436 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 PTPRN2Q92932 1015 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 CAMK1GQ96NX5 476 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 TBCBQ99426 244 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 PSMB7Q99436 277 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 TMEM121BQ9BXQ6 578 aaPredicted RBP9.14□□□□□ -0.95
ATG4A-205ENST00000394892 FAM204AQ9H8W3 233 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 DNAAF2Q9NVR5 837 aaKnown RBP9.14□□□□□ -0.95
ATG4A-205ENST00000394892 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.14□□□□□ -0.95
ATG4A-205ENST00000394892 ARHGEF38Q9NXL2 777 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 ZNF212Q9UDV6 495 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 EIF2B4Q9UI10 523 aaKnown RBP9.14□□□□□ -0.95
ATG4A-205ENST00000394892 PLA2G4CQ9UP65 541 aa9.14□□□□□ -0.95
ATG4A-205ENST00000394892 TNRC6BQ9UPQ9 1833 aaKnown RBP9.14□□□□□ -0.95
ATG4A-205ENST00000394892 PLXND1Q9Y4D7 1925 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 FAM208BQ5VWN6 2430 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 SPAARA0A1B0GVQ0 90 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 LRRC10BA6NIK2 292 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 M0QYT0 321 aa9.13□□□□□ -0.95
ATG4A-205ENST00000394892 PLK4O00444 970 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms