RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 SCUBE3Q8IX30 993 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 PEX5LQ8IYB4 626 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 POU5F2Q8N7G0 328 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 ACSF2Q96CM8 615 aaPredicted RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 UROC1Q96N76 676 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 SEPT5Q99719 369 aaPredicted RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 C16orf70Q9BSU1 422 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 FOXP3Q9BZS1 431 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 PDLIM7Q9NR12 457 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 KRT82Q9NSB4 513 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 LNPEPQ9UIQ6 1025 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 NEU2Q9Y3R4 380 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 ASB3Q9Y575 518 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 FADS3Q9Y5Q0 445 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 COL11A2P13942 1736 aaPredicted RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 AIM2O14862 343 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 KLHL2O95198 593 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 F2P00734 622 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 APOA1P02647 267 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 STIP1P31948 543 aaKnown RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 HALP42357 657 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 TKTL1P51854 596 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 FOLH1Q04609 750 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 NR1D2Q14995 579 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 CCNG2Q16589 344 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 ASTE1Q2TB18 679 aaPredicted RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 LPCAT4Q643R3 524 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 WSCD1Q658N2 575 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 TRAF7Q6Q0C0 670 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 PID1Q7Z2X4 250 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 NET1Q7Z628 596 aaPredicted RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 CLNKQ7Z7G1 428 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 SUN5Q8TC36 379 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 HPS1Q92902 700 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 LPPQ93052 612 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 BORCS5Q969J3 196 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 CMTM5Q96DZ9 223 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 FAM111AQ96PZ2 611 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 FAM118BQ9BPY3 351 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 MRPS26Q9BYN8 205 aaKnown RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 LHX5Q9H2C1 402 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 MTIF3Q9H2K0 278 aaKnown RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 EBF3Q9H4W6 596 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 WDCPQ9H6R7 721 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 MINDY3Q9H8M7 445 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 TMEM39AQ9NV64 488 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 IPO11Q9UI26 975 aaKnown RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 SOX13Q9UN79 622 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 CHKBQ9Y259 395 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 MOXD2PA6NHM9 499 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 MFN2O95140 757 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 ENO3P13929 434 aaPredicted RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 TAC1P20366 129 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 TCHHL1Q5QJ38 904 aaPredicted RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 EGFLAMQ63HQ2 1017 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 DUPD1Q68J44 220 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 RNF19BQ6ZMZ0 732 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 FRA10AC1Q70Z53 315 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 PPM1NQ8N819 430 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 C18orf25Q96B23 403 aaPredicted RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 CFAP36Q96G28 342 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 TMEM169Q96HH4 297 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 OXNAD1Q96HP4 312 aaPredicted RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 PTPN18Q99952 460 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 CORO1BQ9BR76 489 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 GPATCH1Q9BRR8 931 aaKnown RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 STRA6Q9BX79 667 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 OSBPL10Q9BXB5 764 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 CADM1Q9BY67 442 aaKnown RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 CCDC90BQ9GZT6 254 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 AAASQ9NRG9 546 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 ARL8BQ9NVJ2 186 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 DDIT4Q9NX09 232 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 PADI3Q9ULW8 664 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 CAB39Q9Y376 341 aaPredicted RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 TBKBP1A7MCY6 615 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 SYCE1LA8MT33 242 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 E5RJQ4 531 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 PDLIM1O00151 329 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 AP3B1O00203 1094 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 C2CD2LO14523 706 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 MAP3K13O43283 966 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 PEX1O43933 1283 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 GPC4O75487 556 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 SERPINI2O75830 405 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 VNN1O95497 513 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 CCNB1P14635 433 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 CREB1P16220 341 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 TCN1P20061 433 aaPredicted RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 CYP3A5P20815 502 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 VCPP55072 806 aaKnown RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 OXCT1P55809 520 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 YWHAZP63104 245 aaKnown RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 CDK16Q00536 496 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 CACNB2Q08289 660 aaPredicted RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 CDC16Q13042 620 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 IRF5Q13568 498 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 GEN1Q17RS7 908 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 ZNF280DQ6N043 979 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 UTS2BQ765I0 119 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms