RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 MFSD3Q96ES6 412 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 DEFB118Q96PH6 123 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 RGS18Q9NS28 235 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 SCN10AQ9Y5Y9 1956 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 M0QZQ0 153 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 CABYRO75952 493 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 ALDH2P05091 517 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 PDK4Q16654 411 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 HSP90AA5PQ58FG0 334 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 BHLHA9Q7RTU4 235 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 MCUQ8NE86 351 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 ERP27Q96DN0 273 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 VPS11Q9H270 941 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 CHRAC1Q9NRG0 131 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 OSER1Q9NX31 292 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 BFARQ9NZS9 450 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 GMIPQ9P107 970 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 TTC24A2A3L6 582 aaPredicted RBP11.41□□□□□ -0.58
TCOF1-203ENST00000394269 TBKBP1A7MCY6 615 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 SPAG6O75602 509 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 CA8P35219 290 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 SERPINB6P35237 376 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 ZBTB16Q05516 673 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 OTOAQ7RTW8 1153 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 C14orf80Q86SX3 495 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 RPAINQ86UA6 219 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 RASSF3Q86WH2 238 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 ATPAF2Q8N5M1 289 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 CDKL2Q92772 493 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 NACA2Q9H009 215 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 CSNK1G1Q9HCP0 422 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 ABCC13Q9NSE7 274 aa11.41□□□□□ -0.58
TCOF1-203ENST00000394269 RCOR3Q9P2K3 495 aaPredicted RBP11.41□□□□□ -0.58
TCOF1-203ENST00000394269 TPSB2P20231 275 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 MX2P20592 715 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 GARSP41250 739 aaKnown RBP11.4□□□□□ -0.58
TCOF1-203ENST00000394269 TMPRSS15P98073 1019 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 DUSP4Q13115 394 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 SETDB1Q15047 1291 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 PAFAH1B3Q15102 231 aaKnown RBP11.4□□□□□ -0.58
TCOF1-203ENST00000394269 PRKD1Q15139 912 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-203ENST00000394269 TPSAB1Q15661 275 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 PPM1JQ5JR12 505 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 C10orf120Q5SQS8 335 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 SPOUT1Q5T280 376 aaKnown RBP11.4□□□□□ -0.58
TCOF1-203ENST00000394269 LHX8Q68G74 356 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 TMCO2Q7Z6W1 182 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-203ENST00000394269 SCD5Q86SK9 330 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 PSTKQ8IV42 348 aaKnown RBP11.4□□□□□ -0.58
TCOF1-203ENST00000394269 DCP1BQ8IZD4 617 aaKnown RBP11.4□□□□□ -0.58
TCOF1-203ENST00000394269 ZNF296Q8WUU4 475 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-203ENST00000394269 PABPC5Q96DU9 382 aaKnown RBP11.4□□□□□ -0.58
TCOF1-203ENST00000394269 SLC9A7Q96T83 725 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 AGAP2Q99490 1192 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 PCDHA11Q9Y5I1 949 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 NBNO60934 754 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 ITIH4Q14624 930 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 POU6F1Q14863 301 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 PSMD5Q16401 504 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 FYB2Q5VWT5 728 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 SMYD5Q6GMV2 418 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 PRSS55Q6UWB4 352 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-203ENST00000394269 YTHDF3Q7Z739 585 aaKnown RBP11.4□□□□□ -0.58
TCOF1-203ENST00000394269 CIR1Q86X95 450 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-203ENST00000394269 COLGALT2Q8IYK4 626 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 FRMD8Q9BZ67 464 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-203ENST00000394269 ECT2Q9H8V3 914 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 PPCSQ9HAB8 311 aa11.4□□□□□ -0.58
TCOF1-203ENST00000394269 ENPP3O14638 875 aa11.4□□□□□ -0.59
TCOF1-203ENST00000394269 RPLP2P05387 115 aaKnown RBP11.4□□□□□ -0.59
TCOF1-203ENST00000394269 POLBP06746 335 aa11.4□□□□□ -0.59
TCOF1-203ENST00000394269 ETFBP38117 255 aa11.4□□□□□ -0.59
TCOF1-203ENST00000394269 GLUD2P49448 558 aa11.4□□□□□ -0.59
TCOF1-203ENST00000394269 MAXP61244 160 aa11.4□□□□□ -0.59
TCOF1-203ENST00000394269 MGAT5Q09328 741 aa11.4□□□□□ -0.59
TCOF1-203ENST00000394269 CRYMQ14894 314 aa11.4□□□□□ -0.59
TCOF1-203ENST00000394269 TEX44Q53QW1 395 aa11.4□□□□□ -0.59
TCOF1-203ENST00000394269 PM20D1Q6GTS8 502 aa11.4□□□□□ -0.59
TCOF1-203ENST00000394269 TMEM173Q86WV6 379 aaPredicted RBP11.4□□□□□ -0.59
TCOF1-203ENST00000394269 FBXO32Q969P5 355 aa11.4□□□□□ -0.59
TCOF1-203ENST00000394269 NTAN1Q96AB6 310 aa11.4□□□□□ -0.59
TCOF1-203ENST00000394269 ZNF778Q96MU6 729 aa11.4□□□□□ -0.59
TCOF1-203ENST00000394269 TSSK1BQ9BXA7 367 aa11.4□□□□□ -0.59
TCOF1-203ENST00000394269 UNKQ9C0B0 810 aaKnown RBP11.4□□□□□ -0.59
TCOF1-203ENST00000394269 MOXD2PA6NHM9 499 aa11.39□□□□□ -0.59
TCOF1-203ENST00000394269 ARVCFO00192 962 aa11.39□□□□□ -0.59
TCOF1-203ENST00000394269 TRDMT1O14717 391 aaKnown RBP11.39□□□□□ -0.59
TCOF1-203ENST00000394269 EOMESO95936 686 aa11.39□□□□□ -0.59
TCOF1-203ENST00000394269 CYP11A1P05108 521 aa11.39□□□□□ -0.59
TCOF1-203ENST00000394269 FAM163BP0C2L3 166 aa11.39□□□□□ -0.59
TCOF1-203ENST00000394269 CCNB1P14635 433 aa11.39□□□□□ -0.59
TCOF1-203ENST00000394269 SELPP16109 830 aa11.39□□□□□ -0.59
TCOF1-203ENST00000394269 CST5P28325 142 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-203ENST00000394269 TYK2P29597 1187 aa11.39□□□□□ -0.59
TCOF1-203ENST00000394269 CD68P34810 354 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-203ENST00000394269 LBX1P52954 281 aa11.39□□□□□ -0.59
TCOF1-203ENST00000394269 SEPT6Q14141 434 aa11.39□□□□□ -0.59
TCOF1-203ENST00000394269 LRRC8BQ6P9F7 803 aa11.39□□□□□ -0.59
TCOF1-203ENST00000394269 C4orf22Q6V702 233 aa11.39□□□□□ -0.59
TCOF1-203ENST00000394269 TAS1R1Q7RTX1 841 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms